| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1884 |
|---|
| Symbol | |
|---|
| ID | 8807657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1998685 |
|---|
| End bp | 1999368 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | riboflavin synthase, alpha subunit |
|---|
| Protein accession | YP_003461111 |
|---|
| Protein GI | 289209045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.219798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCG GAATCATCGA GACCCTTGGC AACCTGGATC GTCTGACGCC CAGTGGGGGC
GACGTGCGCC TCTACGTGAA TGCGCCGGGG ATGGACCTGT CCGACACTCG TTTGGGTGAC
TCCATCGCTG TCAATGGCGT GTGTCTTACC GTGACTGACC TGACCACCGG GGGCTTCGCT
GCGGACGTCT CGCGCGAGTC ATTGGACGTG ACCACACTGG GGGCCCTGGG GCCTGGCGAC
CGGGTCAACC TGGAGCGGGC GCTGGCCCTG GGCGATCGCC TCGGCGGGCA CATGGTCTCG
GGCCACGTCG ATGGCGTGGG CGAGGTGATC GCGATGGAGC CGGACGCGCG CTCCACCCGC
GTGCGCTTTC GCGCCCCCGC CGCGCTGGCG CGTTACATCG CGGCGAAGGG CTCGATCACC
ATCGACGGCA CCAGCCTGAC CGTGAACCGG GTCGACGGGG CCGAATTCGA GGTCAACATC
ATCCCCCACA CCTGGTCGCT GACCCGCTTC TCCGTCTACG CCGTGGGTAC GCCGGTGAAC
CTGGAGGTCG ACCTGATCGC CCGTTATCTG GAACGGTTGA TGCTCGGCGA GCGTGCGGCG
GAGCCGGGCA CGGACGCCGG CCATCTGTCC GAAGCCTGGC TGGCCGCACA GGGCTTTCCC
AATCATTCCG GGCCGCGCGA CTGA
|
|---|
| Protein sequence | MFTGIIETLG NLDRLTPSGG DVRLYVNAPG MDLSDTRLGD SIAVNGVCLT VTDLTTGGFA
ADVSRESLDV TTLGALGPGD RVNLERALAL GDRLGGHMVS GHVDGVGEVI AMEPDARSTR
VRFRAPAALA RYIAAKGSIT IDGTSLTVNR VDGAEFEVNI IPHTWSLTRF SVYAVGTPVN
LEVDLIARYL ERLMLGERAA EPGTDAGHLS EAWLAAQGFP NHSGPRD
|
|---|
| |