Gene TK90_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1881 
Symbol 
ID8807654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1996290 
End bp1997336 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID 
Productfolate-binding protein YgfZ 
Protein accessionYP_003461108 
Protein GI289209042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.428189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAG ACTGGAAGAA TCACCTGATC GACGCCGGGG CCGAGTTCGA GGACGACGAC 
CTCGTGCACT ACGGCAACCC CGAGCGCGAA CGCCGCATGG CGATCAATGG CGAGGTGATC
TGCGACCTGT CCCATCGGGG CTTGCTGGAG GTCCGCGGGG ACGACGCGAC CGAGTTCCTG
CAGGGGCAGT TCGGCAACGA CATCACCCAG GTCGATGCCA GCCACAGCCA GATTTCCAGC
TATTCCAGCC CCAAAGGTCG GGCCTATGCG GTGTTCCGCG TGCTGCGCAC TGCGGACAGC
TATCTGCTGG AGATGCCGGC CGACCGCATC GAGGCCATCG CCAAGCGGCT GCGGATGTTC
GTGCTGCGGG CCCATGTGGT GATCGAGCGC GCCGACGACT CGCACATCCA CTTCGGGCTC
TCCGGCCCCG ACGCGGAATC CGAGCTGAAC AACGCACTGG GGGTCTGCCC CGCGAACGTG
GACGACGTGG TCGAGAAAGA CGGCGTGACC GTCGTGCGCG TAAACGGCGT GCACCCGCGT
TTCGAGCTGT TCGGCGAGCT CGAACCGATG CGCACCGCCT GGGACAAGCT GAACGTGCGC
TCGGGCCCGG TGGGGCCGCG CGAGTGGGCA TTGCTCGACA TCCTCGCCGG GATGCCGACC
GTGGTCGAGG CGACCAGCGA GCTGTTCGTA CCGCAGATGC TGAACCTGCA CGCGCTGGGG
GCGATCAACT TCGAGAAGGG CTGCTACCCG GGACAGGAGG TGGTGGCCCG CATGCACTAC
CTCGGCAAGC TGAAACGGCG CATGTTCCGC TTGGCGATCC ATGCCGCGGA GCCACCGCAG
CCGGGCTCGC CGGTGTATCG CGCCGACGGC AACCCGGAGC AGGCGGACGG CGAGATCGTG
GCCGCCGAGC TGCACCCGGA CGGGCTCTAC TCGGCTCTGG CGGTGGTGCA GGTGGCGGCC
GCCGAGGGCG AGCTGCACTG GGGGTCACCG GATGGCCCGC GGGCGGAGGT CGTCGACCTG
CCCTACGCGG TACCGGAAGG AGCCTGA
 
Protein sequence
MREDWKNHLI DAGAEFEDDD LVHYGNPERE RRMAINGEVI CDLSHRGLLE VRGDDATEFL 
QGQFGNDITQ VDASHSQISS YSSPKGRAYA VFRVLRTADS YLLEMPADRI EAIAKRLRMF
VLRAHVVIER ADDSHIHFGL SGPDAESELN NALGVCPANV DDVVEKDGVT VVRVNGVHPR
FELFGELEPM RTAWDKLNVR SGPVGPREWA LLDILAGMPT VVEATSELFV PQMLNLHALG
AINFEKGCYP GQEVVARMHY LGKLKRRMFR LAIHAAEPPQ PGSPVYRADG NPEQADGEIV
AAELHPDGLY SALAVVQVAA AEGELHWGSP DGPRAEVVDL PYAVPEGA