| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1846 |
|---|
| Symbol | |
|---|
| ID | 8807618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1962766 |
|---|
| End bp | 1963620 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_003461073 |
|---|
| Protein GI | 289209007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.028301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCC TAGACCCCTG GCTGGCCCGA GCTTCCTACC TGCTGCCGCA ACACGCGCTG
TCGCGGGTCG TGCACCGCCT GGCACGCATC GAGAGCCCGC GTGTGCAGCC GCTGCTGCGC
TGGTTCGTGC GTCAGTACGA GCTGAACATG GACGAGGCGG CGGAGCCCGA CATCGCGGCC
TATCCCAGTT TCAATGCCCT GTTCACGCGC GCACTGCGCG AAGATGCCCG CCCTCTGGCG
GGTGACGACA ACACGGTCGT CAGCCCCGCG GACTCCCGAG TCAGCGCGGC CGGCCGCATC
GAGGCCGGCC AGATCTTTCA GGCCAAGGGC CACCACTACA CGGTGCGGGA ACTTCTGGGC
GGGGAGGAGG ACCTGGCCGA ACCGTTTCGG CACGGCTACT TCGTGACGCT CTACCTGTCG
CCGCGTCACT ACCACCGCCT GCACATGCCA CTGACCGGTA CGCTGACCCA CATGCTGCAT
GTACCCGGCC GGCTCTTCTC CGTCGCGCCG CGCATCGTGC GCCATGTACC GCGCCTGTAT
GCCCGCAACG AACGCGTGGT GGCCTGTTTC GACACCCACT TCGGGCCGAT GGCCGTCGCC
TTGATCGGGG CGCAGAATGT CGGCTCCATC GAGACGGTCT GGGCGGGCGA GGTGACGCCA
CCGGCTGGGC AGCCCTACAG CTGCAGCGAA TATCCGGATC GCGAGATTAC GCTCGAGCGC
GGGGCCGAGA TGGGGCGCTT CAACCTCGGC TCGTCGGTGG TCCTGCTGCT GCCGGATCAT
CCGCTAGAGT TGGGCGCGCA CCTGACGCCG GAGACCGAGG TGCAGGTCCG CGGCGCCCTC
GGCCGCTTCT ACTAG
|
|---|
| Protein sequence | MSALDPWLAR ASYLLPQHAL SRVVHRLARI ESPRVQPLLR WFVRQYELNM DEAAEPDIAA
YPSFNALFTR ALREDARPLA GDDNTVVSPA DSRVSAAGRI EAGQIFQAKG HHYTVRELLG
GEEDLAEPFR HGYFVTLYLS PRHYHRLHMP LTGTLTHMLH VPGRLFSVAP RIVRHVPRLY
ARNERVVACF DTHFGPMAVA LIGAQNVGSI ETVWAGEVTP PAGQPYSCSE YPDREITLER
GAEMGRFNLG SSVVLLLPDH PLELGAHLTP ETEVQVRGAL GRFY
|
|---|
| |