| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1844 |
|---|
| Symbol | |
|---|
| ID | 8807616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1960963 |
|---|
| End bp | 1961757 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_003461071 |
|---|
| Protein GI | 289209005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.00698201 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGAG TGGCAGTGGC AGGCGCCGCC GGGCGCATGG GGCAGAACCT GGTGCAGGCC
GTCGAGGATC ACCCCGAAGG CACGCTGGGG GCGGCGAGCG AGCGGCCGGG CAGCGAGCGC
CTCGGTACGC CGGTGGGATC GGTGGCCCCG GTCCAGCTGG TCGAGGACCT GGCGAGCGTG
GCCGATGACT TCGACGTGCT GATCGACTTC ACCAGCCCCG CGGCGACCAT GCAGCACCTG
GAGCTGTGCC GTGCGCACGG CAAGGCGCTG GTGATCGGTA CCACGGGCCT GGATGCCGCG
CAGGAGCAGC GGCTGCGTGA AGCGGCCGGG GCGATGCGAA TTGTCTATGC ACCGAACATG
AGTGTCGGCG TGAACCTGAC CTTCAAGCTG GTGGAACTGG CCGCCCGTGC ACTGGGCGAC
AGCGTGGACG TCGAGATCCT CGAGGCCCAC CACCGGCACA AGGTGGACGC CCCCTCGGGT
ACGGCCCTGA AGCTCGGCCG GGTAGTGGCC GAGGTCCTGG GACGCGACCT GGAGCACGAC
GCCGTCTATG GGCGCGAGGG CCAGACCGGG GCGCGCGATC GGCGCACCAT CGGCTTCGCG
ACCGTGCGCG CCGGCGACAT CGTGGGCGAG CACACCGCGC TGTTCGCCGG CGAGGGGGAA
CGCATCGAGA TCACCCACAA GGCCTCCAGC CGCGGGATCT TCGCCGCGGG TGCGGTGCGT
GCGGCGGTGT GGCTGGCCGG CGCCGAGCAC GGCCTGTACG ACATGCAGGA CGTGCTGGGG
CTGCGCGAGT TGTAG
|
|---|
| Protein sequence | MIRVAVAGAA GRMGQNLVQA VEDHPEGTLG AASERPGSER LGTPVGSVAP VQLVEDLASV
ADDFDVLIDF TSPAATMQHL ELCRAHGKAL VIGTTGLDAA QEQRLREAAG AMRIVYAPNM
SVGVNLTFKL VELAARALGD SVDVEILEAH HRHKVDAPSG TALKLGRVVA EVLGRDLEHD
AVYGREGQTG ARDRRTIGFA TVRAGDIVGE HTALFAGEGE RIEITHKASS RGIFAAGAVR
AAVWLAGAEH GLYDMQDVLG LREL
|
|---|
| |