Gene TK90_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1790 
Symbol 
ID8807562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1908111 
End bp1908689 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content63% 
IMG OID 
Productelectron transport complex, RnfABCDGE type, A subunit 
Protein accessionYP_003461017 
Protein GI289208951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.335546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00906866 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAATACG TCCTGATCCT CATCAGTACG ATCCTCGTGA ACAACTTCGT ACTGGTGAAG 
TTTCTGGGCC TGTGCCCGTT CATGGGGGTC TCGCGCAAGG TCGAGACGGC CACTGGCATG
GGCCTGGCCA CGACCTTCGT GCTGACGTTG TCTGCGGTCA GCTCCTACGT CATTAACGAA
TATCTGCTGC TCCCGCTCGG GCTCGAATAC CTGCGCACGA TCGCCTTCAT ACTGGTGATC
GCGGCGGTGG TGCAGTTCAC CGAGCTGGTG GTGCGCAAGA CCAGCCCGCT TCTGTACAAC
GTGCTGGGGA TCTTCCTGCC GCTGATCACG ACCAACTGCG CGGTGCTGGG CGTGGCCCTG
CTGAACGTCC AGGAGGCCCA CAACTTCGTC GAGTCCGCGC TGTACGGCTT TGGCGCCGCG
GTCGGCTTCT CCCTGGTACT GATCCTGTTT TCCGCCATTC GCGAACGCAT CGCGGTCGCG
GACGTGCCCG TGGTCTTTCG CGGCAGCGCG GTGGCCATGG TCACGGCGGG CCTGATGTCG
CTGGGATTCA TGGGCTTCTC GGGGCTGGTG CGGCTGTGA
 
Protein sequence
MEYVLILIST ILVNNFVLVK FLGLCPFMGV SRKVETATGM GLATTFVLTL SAVSSYVINE 
YLLLPLGLEY LRTIAFILVI AAVVQFTELV VRKTSPLLYN VLGIFLPLIT TNCAVLGVAL
LNVQEAHNFV ESALYGFGAA VGFSLVLILF SAIRERIAVA DVPVVFRGSA VAMVTAGLMS
LGFMGFSGLV RL