Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1670 |
Symbol | |
ID | 8807442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1789980 |
End bp | 1790426 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | Host attachment protein |
Protein accession | YP_003460901 |
Protein GI | 289208835 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.20183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.815187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATACCG TATGGATCGT TGTGGCCGAT GCTGCCCGCG CGCGCATCCT CAGTTGTGAA GGTCGAGCCT GTCAGGGTTT GCACGAGATC GAAACCCTGG CGCACTCCGA GTCCCGCGTA CATGCCCAGG AACTGGTCAC CGACCGGCCC GGCCGCAGCT GGAGCAGTTC GGGTGATGGC CGCCACGCCA TGCAGGAGAC AACCGATCCG AGCGTCAACG AACGCAACCG CTTTGCCCGC GAAGTGGCCG AACGCCTGAA ATCGGGCTAT CACGGCGGCA GCTACCAGCG GCTGGTGATC CTCGCCGCAC CCCAGTTCCT GGGGGCCCTG CGCGAACTGC TGGACCCGCA GGTCGCGCAG ATCGTCACTT CCCAGATCGC CAAGAACGTT TCCAAGATCC AGGACCCGGC CGCCCTGCGC AGCCACCTGC CGGACTTTCT CTACTAG
|
Protein sequence | MDTVWIVVAD AARARILSCE GRACQGLHEI ETLAHSESRV HAQELVTDRP GRSWSSSGDG RHAMQETTDP SVNERNRFAR EVAERLKSGY HGGSYQRLVI LAAPQFLGAL RELLDPQVAQ IVTSQIAKNV SKIQDPAALR SHLPDFLY
|
| |