| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1667 |
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| Symbol | |
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| ID | 8807439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1786051 |
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| End bp | 1788651 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003460898 |
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| Protein GI | 289208832 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.378784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG AACGTCCTGC ATCCCCGCGC CGGGCCCTGC GACTGCGGCT GTTCATCGTC
GCCGCGATCA TGGGCGTGGC CCTGCTCGTG TTCCTGACAG TCCACATCAC CTCCACGCTG
ATCTACGAAC GCACGATGAC ACGCCAGGCG GAACAGACCG CCAGCGGCAT CGCCCACCAG
ACCTTCGCCT CGATGTTTCA GATCATGCGC GAGGGCTGGA CCCGCGAGCA GCTGGAGGCG
TTTTCGGCCG GGATCGAGGA ATCGCTGGCG GATACGCCGC TGCGGCTGGA CTTCTATCGC
GGCGAGAAGG TGGCGGCCCT GTATGGCGAA GTGGACCAGC CCACCTGGCA CGAACGGATC
GAGCATGCAT TCGAGACGGG GGCCATTGAG AGTCGCCAGG ACAACGGCGA GCTGCGCTAC
ACCTTCCCCT TGCGCGCCCG CAACGAGTGC CTCGCCTGCC ATGGCAATGC CTCCACCGGC
GATGTGCTCG GAGTGATGGA GGTGCGCCAG GACCTGGGTA CGGCCATCAG CGAGGCGCGC
AACCAGCACG TCTGGACCTT CCTGGGGACC GGGCTGGGCA CGCTGCTGCT GGGTTCCCTG
ATCGCCGCCT GGGCGACGGC GCCCATCACC CGTTCGGTGC GCCGCTTCCA GGATCAGGTG
ACCCAAGTCA ACGCGATCAA GGACCTCAAC CACGTCGAGA CGCAGGCAAT CGACACCGGC
TTTGTGGAGC TCAACCAGGT CGTCGATCAG GTGGATGACC TGGTGCGCAA GCTGCGCGCG
GTCGCGGTGG ACAAGGACAT CCTCGAGTTC GAGCTGAAGC TGCTCGACAA ATTCATCATC
ACCTCGGACG TGGTGCGGGA CTGGCGCGAA TACATCGGGG TCTTGCTGAC CGAGATCAAC
ACGATCATCG ATGCCTACAC CCTGTTCACC CTGTTCAAGG CCAACGACGA CATCTACGAG
CTGGAGATCT TCTGGCGCGC AGAACCCAAA GAGGCCACAC GACGCACCGT GGAACGGCTG
GCCACGCATC GCATCCGGGC ATCCGAGGAG TTCGTGCGGG ACGCGAACAT CAGCGTGCGG
CACAACGTCG CCGATGCCTC CAGTCATCTG CCGGAACTCT CGCCCCGCCA GATCGAGCTG
GCGACCAAGT CGCTGGTGCT GGACACCCCA CGCATTGGCG GTGTGGTCGG GATCGGCGTG
CAGTCCGAGC TGGTGCGCGA CCCGGTCCGG CACGTGGTGA TCGAGAGCAT CTTGTCGACG
CTGCTGAACC TCGTCGGCTC GGTGAAGGCG ATCTACAAGT ACACCCAGGA CCTCGAGCAC
TACGCCACCC GTGACCCGCT GACCAATCTG TACAACCAGC GGGTGTTCTG GGAACTGTTC
AACTACGAGA TCAAGCGTGC CGAGGGGCAT GGCTACCCCT TCGCGGTCAT GGTCGTGGAC
CTGGACAACT TCAAGACCAT CAACGACCGC TACGGCCATG CCTTTGGTGA CCGCTTCCTG
CAGGCCTATT CCGAGACGAT CCAGGGCGCG ATCCGCAACG AGGATATCCT GGCCCGGTAC
GGGGGCGACG AGTTCGCGCT GATCCTGCCC GAGACCGACC AGCAGTCCGC CTGGCAGCTG
GCCGCGCACA TGGCCGAGGC CACCGATGGC CTGTCGCTCC CGGCCCCGGA CGGCTCGCGG
GTCAGGGCCA CCACCTGCAT CGGCATCGCC GCCTACCCAA GACACGGCAA GGACACGCGC
GACCTGTTCC TGGTGGCCGA CAACATGATG TACAAGGCCA AGCGCGAGGG GAAAAACGCG
GTCTGCGTGC CGAGCGACGA GGAAGTGGCC GCGGTGTTCC GCGAGGCGGG CGAGACCGGG
ATCATGATCA TGGAGGCGCT GGAAGACCGC CGCATCGTGC CCTACTTCCA GCCGATCATG
GACACCACCA CCGGCGAGGC CCATATCCAC GAGCTGCTCA TGCGCATCCG CGTGGGCGGC
GAACTGATCC CGGCGGGCCA GTTCGTCGAG GTCGCCGAGA CCATGGGGGT GATGCACCAG
CTCGACTATG TACTGATCGA GCAGGCCTTC ATCGAGGTCA GCCGCTCCGG CTACTCGGGG
CTGTTGTTCA TCAACCTCTC GCCGCGCGCG CTGATCATTG GCGAGTTCAT CGGCAAGGTC
CGCCAGCTCG CGCACGACCA CGGCATCGAA CCGGCCAAGG TGGTGTTCGA GATCACCGAG
CGTGACACGG TGAAAAACAT GGCCGTGCTG GAGCAGTTCG TGCTCGACCT GAAACAGCAG
GGTTTCCAGT TCGCGGTCGA CGACTTCGGC TCGGGCTTTT CCTCGTTCCA CTACCTCAAG
CGCTTCCCCA TCGACTTCGT GAAGATCGAG GGCGATTTCG TGCGTAATAT GGTCCACGAC
GCACGCGACC AGGCGTTTGT GCGCTCCATC GCAGCGCTGG CGCGCGACCT GAACGTACGC
ACCATCGCCG AATTCGTGGA AGACGCCGAG ATCCTGGAAG CAGTCAGGTC CATCGGCATC
CACTACGCCC AGGGCTTTCA CGTGGGCCAC CCCGGCCCAG GGCCGCTGCC CGGCCCCGGG
GACGGCAAGA CCCGCCACTG A
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| Protein sequence | MSAERPASPR RALRLRLFIV AAIMGVALLV FLTVHITSTL IYERTMTRQA EQTASGIAHQ
TFASMFQIMR EGWTREQLEA FSAGIEESLA DTPLRLDFYR GEKVAALYGE VDQPTWHERI
EHAFETGAIE SRQDNGELRY TFPLRARNEC LACHGNASTG DVLGVMEVRQ DLGTAISEAR
NQHVWTFLGT GLGTLLLGSL IAAWATAPIT RSVRRFQDQV TQVNAIKDLN HVETQAIDTG
FVELNQVVDQ VDDLVRKLRA VAVDKDILEF ELKLLDKFII TSDVVRDWRE YIGVLLTEIN
TIIDAYTLFT LFKANDDIYE LEIFWRAEPK EATRRTVERL ATHRIRASEE FVRDANISVR
HNVADASSHL PELSPRQIEL ATKSLVLDTP RIGGVVGIGV QSELVRDPVR HVVIESILST
LLNLVGSVKA IYKYTQDLEH YATRDPLTNL YNQRVFWELF NYEIKRAEGH GYPFAVMVVD
LDNFKTINDR YGHAFGDRFL QAYSETIQGA IRNEDILARY GGDEFALILP ETDQQSAWQL
AAHMAEATDG LSLPAPDGSR VRATTCIGIA AYPRHGKDTR DLFLVADNMM YKAKREGKNA
VCVPSDEEVA AVFREAGETG IMIMEALEDR RIVPYFQPIM DTTTGEAHIH ELLMRIRVGG
ELIPAGQFVE VAETMGVMHQ LDYVLIEQAF IEVSRSGYSG LLFINLSPRA LIIGEFIGKV
RQLAHDHGIE PAKVVFEITE RDTVKNMAVL EQFVLDLKQQ GFQFAVDDFG SGFSSFHYLK
RFPIDFVKIE GDFVRNMVHD ARDQAFVRSI AALARDLNVR TIAEFVEDAE ILEAVRSIGI
HYAQGFHVGH PGPGPLPGPG DGKTRH
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