| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1621 |
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| Symbol | |
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| ID | 8807393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1730421 |
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| End bp | 1733567 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003460854 |
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| Protein GI | 289208788 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.557587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.228387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCT TTTTCATCGG CCGGCCGGTA CTGGCCTCGG TCATCTCGAT CCTGTTCGTG
CTGGCGGGCC TGTCTTCGGC CCTTCTGCTC CCGGTCGACC AGTATCCGGA CATCCTGCCG
CCGAAGGTGA TCGTGACCGC CAGTTATCCG GGCGCGAGCG CCGAGGCGGT GGCGGAGACG
GTGGCCGCCC CGATCGAGGC AACGGTCGAT GGCGTGGACA ACATGGCGTA CATGCGCTCG
AAGTCCACCG ACGACGGCGA CATGGAGCTG ATCGTTACCT TCGAGGTCGG GACCGACCCC
GACATCGCCG CGATCAACGT CAGCAACGAG GTCGAAGGCG CGATGGGGCG CCTGCCGGAG
ACGGTGACCG GTGCCGGGAT CGCGGTGGAG AAACGCGCCC CGTCGATGCT GCAGATGATC
ACGTTCACCT CGTCGGACGG CAGCCTCGAC AACCGCTTTA TCAGTGACTA CGTCTGGCGC
AACGTCTATG CGGAGCTGCG CCGCGCGCCG GGGGTGGGCG ACCAGACCTT CTTTGGCGCA
CAGATTTATT CGATGCGGAT CTGGCTGCAG CCGGACCAGA TGGCGGAGTA CGACCTGACC
GCCAGTGACA TCCGCTCCGC GATCCAGGAG CAGAACGAGC AGTACGCGGC CGGCCAGTTC
GGCGCCGAGC CGATGGAGAA CGCGATCGAC TTCACCTATG CGGTGACGAC CCCCGAGCGG
TTCTCCGAGG AGGAGGAATT CGAGCAGGTG ATCCTGCGCA GTGCGCCGGA CGGTTCCGCC
CTGCGGCTGG GTGACGTGGC GCGGGTGGAG CTGGGCGCGC ACTTCTACAA CTTCGATGCC
AAGCACAACG GCCAGTCCAC CGTGCCGGTG GGGGTCTACC TGGAGCCCGG CGCCAACGCG
CTGGAGACGG CGCGCGGGGT GCGCGAGATC CTGGAGGAAC TGGAGCCGCG TTTCCCGGAT
TCGCTGGAAT ACTCGATCCC GTTCGATACC ACGATCTTCA TCGACCAGTC GGTGCAGCGC
GTACTGCTGA CCCTGGTGCA GGCGCTGATC CTGGTGGTCG CAGTGGTGTA TCTGTTCCTG
CAGACGTTCC GGGCTACGGC CGTGCCGATC ATCGCGGTGC CGGTCTCGCT GATCGGGACG
CTGGCCGGGA TGTACGTGCT CGGCTTTTCC GCGAACATGC TGACGCTGTT CGGGCTGGTG
CTGGCGATCG GGATCGTGGT GGACAACGCG ATCATTGTGC TCGAGAACAC CGAGCGGCTG
ATGCGCGAGC AGGGGATGAA GGCCGTCGAT GCGGCCTATC AGACCGTGGA CGAGGTGGCC
ACACCGATCA TCGCGATGAC GCTGGTCACC ATCGCGGTGT TCGTGCCGGT TGCCTTTATC
GGCGGATTCA GCGGGCAGAT GTACCAGCAG TTCGCGATCA CCATCGCCGT ATCGGTGGGG
ATCTCGGGGA TCGTCGCGCT GACCTTGAGC CCGGCGATGT GCGCGCGCCT GTTGTCCGAC
AAGCCCCGCC GTCCGGCCTT CCCGTTTCGC TGGTTCAACA GCACGTTCGA CCGCTTCACC
GCCGCCTACA TGGTAGGGGT GCGCTTCCTG CTGCGGCGCA ATTTCGTGGG CATGGGCCTG
TTCGCGCTGC TGCTGGTGGC GATCGTGGTG CTGTTCCGGA TCGTGCCCGG TGGCCTGGTG
CCGCAGGAGG ATCAGGGGTA TGTGTTCGCC GCCGCCGAAC TGCCCGCCGC GGCCTCGCTG
CAGCGTACCC GTGATGTCAT GGATCGCCTG GGCGAGGAGG CGCTGGAGTA CGACGACACC
GCGGACGTCG TGGCCTTCTC CGGCATGGAC CTGCTGTCCG ACGGCATGAA GACCTATGCC
GGCGCGGCCT ATGTGACGCT CAATGACTGG TCCGAGCGTC GCGGCGACGA TCAGAGCAGC
GACGCGGTGA TCGACCGTCT GGTCGCCGAT GGCGAACGCC AGCCGGAGGC GACGATCCGT
GCGTTCAATC CGCCGCCGAT CACCGGCATC TCCACCACGG GCGGGTTCGA GGCCTATCTG
CAAAGCCGGG TGGGGGATGA CTCGGAAACC ATGCGCGAGC GCGCCGAGGA GATTATTGCG
GCGGCCGCGG AGCGCCCGGA GCTGGCGGAT GTGCGCACCT CGCTCAATAT CGAGGTGCCG
CGTTACGACG CCGATGTGGA TCGCGAACGG GCCTTTGCCG CCGGGGTGCC GATCGCGGAC
GTGTTCGACG CGATGCAGAG CACCTTCGGT GCGGTCTACA TCAACGACTT CTCGCTGTTC
GGCCGGGTGA TGCAGGTGCA GATGCAGGCC GAGGCCGATT ACCGCCGGAG CCCGGATGAT
CTCGATCGCA TCTTCGTGCG CTCGGATGGT GGCGACCTGG TGCCGCTGTC CAGCCTGGTG
TCGGTCGAGC GGGTACAGGG ACCGGACGAG GTGGAGCGCT TCAACGTGTT CCCCGCCGCG
CGGATCATGG GCGAGCCCGC ACCCGGCTAC AGCTCGGGGG ATGCAATACA GGCACTGGAG
GAAGTGGTCG ACGAGACCCT GTCGGACGAC TACCTGCTGA GCTGGACCGG TGCCGAGTAC
CTGGAGCAGC AGGCGGCGGG GACCTCGGTG CTCGCTTTCG TTCTGGGGGT GGTCTTCGTG
GTGTTGATCC TGGCCGCCCA GTACGAGCGA TGGACGCTGC CATTGGCCGT GCTGATGGCC
GTTCCGTTCG CAATCTTCGG GGCCCTGGTC GCGGTCTGGC TGACCGGGCA GGAGAACGGG
ATCTACTTCC AGATCGGTCT GCTGGTGCTG GTCTCGCTGG CGGCCAAGAA CGCGATCCTG
ATCGTCGAAT TCGCGCAGAA CAAGCGCAAC GAGGGCCTGA GCCTGTTCGA TGCCTCGGTG
GAGGCGGCCC GCCTGCGTTT CCGGCCGATC ATGATGACGG CGATGTCGTT CATCCTGGGC
GTGGTTCCGC TGGTACTGGC AACCGGCGCG GGTGCGAACA GTCAGCACGC GATCGGCATC
GGCATCATTG GCGGCATGCT GAGCGCGACC TTCCTCGCGC TGCTGTTCGT GCCCCTGTTC
TATTTTGTCA TTTCCAGTGG CATGGAGCGC CTGAGCAAGC GCCCGCGCGA CACGGACGAC
CCGAAGGAGG CCGGAACGCA TGCGTAG
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| Protein sequence | MLRFFIGRPV LASVISILFV LAGLSSALLL PVDQYPDILP PKVIVTASYP GASAEAVAET
VAAPIEATVD GVDNMAYMRS KSTDDGDMEL IVTFEVGTDP DIAAINVSNE VEGAMGRLPE
TVTGAGIAVE KRAPSMLQMI TFTSSDGSLD NRFISDYVWR NVYAELRRAP GVGDQTFFGA
QIYSMRIWLQ PDQMAEYDLT ASDIRSAIQE QNEQYAAGQF GAEPMENAID FTYAVTTPER
FSEEEEFEQV ILRSAPDGSA LRLGDVARVE LGAHFYNFDA KHNGQSTVPV GVYLEPGANA
LETARGVREI LEELEPRFPD SLEYSIPFDT TIFIDQSVQR VLLTLVQALI LVVAVVYLFL
QTFRATAVPI IAVPVSLIGT LAGMYVLGFS ANMLTLFGLV LAIGIVVDNA IIVLENTERL
MREQGMKAVD AAYQTVDEVA TPIIAMTLVT IAVFVPVAFI GGFSGQMYQQ FAITIAVSVG
ISGIVALTLS PAMCARLLSD KPRRPAFPFR WFNSTFDRFT AAYMVGVRFL LRRNFVGMGL
FALLLVAIVV LFRIVPGGLV PQEDQGYVFA AAELPAAASL QRTRDVMDRL GEEALEYDDT
ADVVAFSGMD LLSDGMKTYA GAAYVTLNDW SERRGDDQSS DAVIDRLVAD GERQPEATIR
AFNPPPITGI STTGGFEAYL QSRVGDDSET MRERAEEIIA AAAERPELAD VRTSLNIEVP
RYDADVDRER AFAAGVPIAD VFDAMQSTFG AVYINDFSLF GRVMQVQMQA EADYRRSPDD
LDRIFVRSDG GDLVPLSSLV SVERVQGPDE VERFNVFPAA RIMGEPAPGY SSGDAIQALE
EVVDETLSDD YLLSWTGAEY LEQQAAGTSV LAFVLGVVFV VLILAAQYER WTLPLAVLMA
VPFAIFGALV AVWLTGQENG IYFQIGLLVL VSLAAKNAIL IVEFAQNKRN EGLSLFDASV
EAARLRFRPI MMTAMSFILG VVPLVLATGA GANSQHAIGI GIIGGMLSAT FLALLFVPLF
YFVISSGMER LSKRPRDTDD PKEAGTHA
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