Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1620 |
Symbol | |
ID | 8807392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1728941 |
End bp | 1730428 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_003460853 |
Protein GI | 289208787 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.596211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGGA CGCTGTTGGG GGTTTCTGCG GCCGCGCTGC TGGCCGGGTG TGCGGTCGGG CCGGACTACG AGCGCCCGGA GGTCACGCTC CCGGACGAGT GGCCGGAGGA GATCGGTGAC CAGATGGACA CCGACTACGC CGACGCCGAG TTCTGGTGGG AGATGTTCGA GGACCCGCTG CTGGATCGCC TGGTGCGCGA GGCGCTGGAG AACAATATCG AGGCGGAAAT CGCCGCGGCG CGGGTGGTGC AGGCGCGGGC GGTGCTGGGC CTGAGTCGTG CCGAGCAGTT TCCTCAGTTG GACGGGTTCG CCGAGTTCGA ACGCGAGTAT CCAGCGGGGG ACGATGACCC GGAAACCGAG ATTGCGATCG GGACGCTGCT GAGCTACGAG GTCGATCTAT GGGGGCGGCT GTCGCGCGCA GAGGAGGGAG CGCGGGCGCA ACTGCTGAAC ACGGCGTTTA CCCGTGATGC CACCCGCCTG GCGGTTGTGA GCGATGTGGT CAGCACCTAT TTCGACTACC GCGCCACGCG GGAGCAGATC GAGACCACCG AGGCGACGAT CCTTTCCCAG ATCGAGGCGC TGGAACTGGA GCGCTCGCGC CGCCAGAGTG GTGCCACTAC CGATCTCACC GTGCGCCAGG CCCAGGCCGA GCTGGAGACC AGCCGCGCGG GCCTGCCCGA TCTGCGCGCC GATGCCGCAC AGCAGCGCCG GGCGCTGGCA GTCCTGGTCG GGGATACCGA GGCGGTGGTC GAGGGCCTGG AGGGGCTCGG CGACGAGGGT CTGGAAGACC TGCCGGATAC GATCTCCGGA CTCCCGCATT CAGTACCGTC GGACCTGATG ATCCGCCGGC CGGATATCCG GGCGGCGGAG GCCAGCCTGA TTGCGGCCAA TGCCGATATC GGCGTGGCCC GCGCGGAATG GCTGCCGAGC CTGAACCTGG CCGCGCTGTT CGGGCAGGAG GTCAGCCGGG TCAGCCAGTT TTCCTCCAGT GATTCGTTCT TCTGGGAGTT CCTGGCGGAG TCCACGGTGC CGATCCTCGA TTTCGGGCGG CGGCGCGCCA CGATCGAAGG CGTGGAGGCC GAGCGCGATA TCGCCGAACT GGAATACCGC GCGGCGATTC AGGAGGCCCT GGAAGAGGTC GCCAATACCT GGAGCGTGCT GAACGCGGCG CATGAGCGGG TGGAGGTGCG CCAGCGCGAA GTCGGGGCCC GGGTCGAGGT GCTGGACCTG GCGGAGCGCC GCTATCTGGG CGGGTTCGTG GGCTATCTGG AGGTGCTGGA TGCGCGGCGG GCCCTGCTGG ATGCGCGCCT GACGCTGACC GAGGCCTCGC GTGATCGTCT GGCGGCCACC GCGACGCTGT TCCGCGCCCT GGGCGGTGGC TGGGACAGCG CCGCGATTCC GCATGATGTG CTGGAGGACG ATGACCCGGA TGCCGCCGAG GCGGAAGCTG AGGAGCAAAT CATCGTCCCG GCCGATTCGG AAGACTGA
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Protein sequence | MRRTLLGVSA AALLAGCAVG PDYERPEVTL PDEWPEEIGD QMDTDYADAE FWWEMFEDPL LDRLVREALE NNIEAEIAAA RVVQARAVLG LSRAEQFPQL DGFAEFEREY PAGDDDPETE IAIGTLLSYE VDLWGRLSRA EEGARAQLLN TAFTRDATRL AVVSDVVSTY FDYRATREQI ETTEATILSQ IEALELERSR RQSGATTDLT VRQAQAELET SRAGLPDLRA DAAQQRRALA VLVGDTEAVV EGLEGLGDEG LEDLPDTISG LPHSVPSDLM IRRPDIRAAE ASLIAANADI GVARAEWLPS LNLAALFGQE VSRVSQFSSS DSFFWEFLAE STVPILDFGR RRATIEGVEA ERDIAELEYR AAIQEALEEV ANTWSVLNAA HERVEVRQRE VGARVEVLDL AERRYLGGFV GYLEVLDARR ALLDARLTLT EASRDRLAAT ATLFRALGGG WDSAAIPHDV LEDDDPDAAE AEAEEQIIVP ADSED
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