Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1539 |
Symbol | |
ID | 8807308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1638466 |
End bp | 1639017 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | sugar transferase |
Protein accession | YP_003460777 |
Protein GI | 289208711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0350538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0019273 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATACGGG TTCTGGATGT GGTGCTGTCG GTTTTGGGGT TGATTGTGGC GGTGCCGTTG ATGTTGGTGT TGTGGATTGC GCTTTGGTGG GTTGCGCGTT CGCCGCTGTT TCGGCAGGAG CGTGTGGGGC GGTATCAGCG GCCGTTTGTG CTGGTGAAGT TTCGGACGAT GCGGCCGGAT ACGGCGTCGG TGGCGACGCA TCTGGCGCAG GCTTCGTCGA TTACGCGCTT GGGCCACTTT CTGCGCAAAA CGAAGCTGGA TGAGTTGCCG CAGCTTTGGA ATGTGCTGAA GGGGGAGATG AGCCTGGTGG GGCCGCGGCC TTGTCTGGTG AGTCAGGTGG AGTTGATCGC GGCGCGGGAG GCGCGTGGCG TGTTTGCGGT GCGCCCGGGC ATTACCGGGC TGGCGCAGGT GAACGGGATC GATATGTCGG ACCCCGAGAG GCTGGCCGAG ATGGATGCGA AGATGATTGA GTCGCTGACG CTTGTGAGTT ATTTCCGGTA TCTGGTTTTG ACGGTTACGG GGAAGGGTTC TGGGGATCGG GTTCGGGGTT AA
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Protein sequence | MIRVLDVVLS VLGLIVAVPL MLVLWIALWW VARSPLFRQE RVGRYQRPFV LVKFRTMRPD TASVATHLAQ ASSITRLGHF LRKTKLDELP QLWNVLKGEM SLVGPRPCLV SQVELIAARE ARGVFAVRPG ITGLAQVNGI DMSDPERLAE MDAKMIESLT LVSYFRYLVL TVTGKGSGDR VRG
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