Gene TK90_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1539 
Symbol 
ID8807308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1638466 
End bp1639017 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content61% 
IMG OID 
Productsugar transferase 
Protein accessionYP_003460777 
Protein GI289208711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0350538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0019273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATACGGG TTCTGGATGT GGTGCTGTCG GTTTTGGGGT TGATTGTGGC GGTGCCGTTG 
ATGTTGGTGT TGTGGATTGC GCTTTGGTGG GTTGCGCGTT CGCCGCTGTT TCGGCAGGAG
CGTGTGGGGC GGTATCAGCG GCCGTTTGTG CTGGTGAAGT TTCGGACGAT GCGGCCGGAT
ACGGCGTCGG TGGCGACGCA TCTGGCGCAG GCTTCGTCGA TTACGCGCTT GGGCCACTTT
CTGCGCAAAA CGAAGCTGGA TGAGTTGCCG CAGCTTTGGA ATGTGCTGAA GGGGGAGATG
AGCCTGGTGG GGCCGCGGCC TTGTCTGGTG AGTCAGGTGG AGTTGATCGC GGCGCGGGAG
GCGCGTGGCG TGTTTGCGGT GCGCCCGGGC ATTACCGGGC TGGCGCAGGT GAACGGGATC
GATATGTCGG ACCCCGAGAG GCTGGCCGAG ATGGATGCGA AGATGATTGA GTCGCTGACG
CTTGTGAGTT ATTTCCGGTA TCTGGTTTTG ACGGTTACGG GGAAGGGTTC TGGGGATCGG
GTTCGGGGTT AA
 
Protein sequence
MIRVLDVVLS VLGLIVAVPL MLVLWIALWW VARSPLFRQE RVGRYQRPFV LVKFRTMRPD 
TASVATHLAQ ASSITRLGHF LRKTKLDELP QLWNVLKGEM SLVGPRPCLV SQVELIAARE
ARGVFAVRPG ITGLAQVNGI DMSDPERLAE MDAKMIESLT LVSYFRYLVL TVTGKGSGDR
VRG