Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1519 |
Symbol | |
ID | 8807285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1618878 |
End bp | 1619522 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_003460759 |
Protein GI | 289208693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000729179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACCA CCGACCACCG TCACACCCGC CGCGACTACA CCCAGGGCGA ACTCCACCGC CGCGACCTGC TCGACAACCC GCTGACCCTG CTCGACCGCT GGCTGGACGA CGCGCGCAAG GCCGGCAACC CGGACCCCAC CGCGATGATC CTCGCCACGG CCGACGCCGA TGGCCAGCCC TCCGCGCGCA CGGTTCTGCT CAAGCATGTC GAGGGCGAAG ACCTCTGCTG GTACACCGAC TCCCGCAGCC GCAAGGGTCA GGACCTCACC GAGAACCCGC GCGCCGCCCT CCTGTTTTAC TGGCCCGAGA CCGAGCGCCA GATCCGCGTC GAAGGCAGCG TGACCGCCCT GCCCGGCGAG GCCGCGGACG AATACTTTAC CCAGCGCCCG CGCGCCAGCC AGCTCGCCGC GGCCGCCTCC ATCCAGAGCC AGCCCATCAG CACCCGCGCC GAACTCGAGG CCCGCGTTCA CGCACTGGAG AAGCAATACC CGGAAGGCGC GATCCCCCGG GATCCCGCCT GGATCGGCTA CCGCCTGCAG CCCGAGCTGT TCGAGTTCTG GCAGGGCCGG GCCGGCCGCC TGCACGACCG CTTCCAGTAC CACCGGGCGG ACAATGGCTG GCACATCACT CGCCTGATGC CCTGA
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Protein sequence | MSTTDHRHTR RDYTQGELHR RDLLDNPLTL LDRWLDDARK AGNPDPTAMI LATADADGQP SARTVLLKHV EGEDLCWYTD SRSRKGQDLT ENPRAALLFY WPETERQIRV EGSVTALPGE AADEYFTQRP RASQLAAAAS IQSQPISTRA ELEARVHALE KQYPEGAIPR DPAWIGYRLQ PELFEFWQGR AGRLHDRFQY HRADNGWHIT RLMP
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