| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1515 |
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| Symbol | |
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| ID | 8807281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1613395 |
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| End bp | 1615671 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003460755 |
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| Protein GI | 289208689 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0572332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00245581 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCTG TCCCCGATTT CCCGCCTTCG CTGTTTGCGC GCAAGCCCTA CTGGGCCAAG
CGCTTCGGTA CCGCACCGTT TCTGCCGACC ACCCGCGAGG AGATGGACGA CCTCGGCTGG
GACAGCTGCG ACATCGTGCT GGTCACCGGG GACGCCTATG TCGACCACCC GAGCTTTGGT
ATGGCGATCA TCGGGCGGTT GCTGGAGGCG CAGGGCTTTC GCGTCGGCAT CATCGCGCAG
CCGGACTGGA CCTCGGCCGA GCCGTTCCGC GCGCTGGGCC GTCCCAACCT GTTCTTTGGC
GTCACCGCCG GGAACATGGA TTCCATGGTC AACCACTACA CGGCTGACCG GAAGATCCGC
TCCAACGATG CATACACCCC GGGCGACGTG CATGGCCATC GGCCGGACCG CGCGGTGATC
GTCTACGCGC AGCGCGCCCG CGAGGCCTAC AAGGACGTAC CGGTGGTGGC CGGCGGGATC
GAGGCCAGCC TGCGCCGCAT CGCCCACTAC GACTACTGGC AGGACAAGGT ACGCCGGTCG
GTGCTGCTGG ATGCGCGGGC CGACATCCTG CTGTTCGGCA ATGCCGAGCG CGCCCTGGTG
GAGCTGGCGC ACCGCGTGGC CGCCGGTGAG CACCCCCGCG AGATCACCGA CCTGCGCGGC
ACGGCCTTTC TGCGCGATGC CGTGCCAGCC GGCTATGTCG AGCTGGACTC CAGCGAGGTG
GACACCCCGG GCCCGGTGGA TGCCAACCCC GATCCCTATG CGATGGTGTC GCCGTCCACC
TGCGCCGAGG CCGAGACGAA GGCGGAGTCG GAGGACACGG CCGGCGAAGG TGGTGCGCAG
GTCGTTCGTT TTCACCGGGA TATTCCGCGC GGCACGCCGC GAGACAAGAC GGTGATCCGC
ATCCCGGCCT TTGAACAGGT CAAGGGCGAT TCCGTGCTGT ATGCGCATGC CTCTCGCGTG
CTGCATCTGG AGACCAACCC GGGCAATGCC CGCGCCATCG TGCAGCGCCA TGGCGACAAG
GAGGTCTGGC TGAACCCGCC GCCGATCCCG TTGACCACCG CCGAGATGGA TGCGGTGTTC
GACCTGCCGT ATGCCCGTGC GCCGCATCCC TCCTATGGCG ATGCGCGCAT CCCGGCCTGG
GAGATGATTC GCTTCTCGGT GAACATCATG CGCGGCTGCT TTGGGGGCTG TACGTTCTGT
TCGATTACCG AGCACGAGGG ACGGATCATC CAGAGCCGCT CCGAGGAGAG CGTGCTCAAG
GAGATCGAGG AGATCCGCGA CAAGGTCGAC GGGTTTACCG GCGTGGTCTC CGATCTCGGC
GGGCCGACGG CCAACATGTA CCGGCTGGCC TGCAAGGACC CGGAGATCGA GCGCAGTTGC
CGCCGGCTGT CCTGTGTCTA TCCCGGGATC TGCAAGAACC TCGATACCGA CCACACGCCG
CTGGTGAACC TCTACCGCAA GGCGCGGGCG TTGCCGGGCA TCAAGAAGAT CCTGATCGCC
TCGGGTCTGC GCTACGACCT GGCCGTGGAA TCACCGGAAT ACGTGAAGGA ACTGGTCACG
CATCACGTGG GAGGCTACCT GAAGATTGCG CCGGAACATA CGGAATCCGG GCCGCTTTCT
CGCATGATGA AGCCGGGCAT GGGCGCCTAC GACCGCTTCA AGGCGATGTT CGAGAAGTAC
TCGAAACAGG CGGGCAAGGA GCAGTACCTG ATCCCGTACT TCATTGCCGC GCACCCGGGG
ACGTCCGACG AGGACATGCT GAACCTCGCG CTCTGGCTGA AGCGCAACAA CTTCCGCGCC
GATCAGGTGC AGGCCTTCCT GCCCAGCCCG ATGGCGCTCG CGACCGCAAT GTGGCACTCC
GGGCGCGATC CGCTGCGCGG CATCAAACGC AAGGCCGGGG ACCGCGTGCC GGTCGCGCGC
GGTGCGCGGG CGCGGCGCCT GCACAAGGCG TTCCTGCGCT ATCACGATCC GAACAATTGG
CCGCTGCTGC GTGATGCGCT CAAGCGCATG GGCCGCGCGG ACCTGATCGG CAATGGCAAG
CATCACCTGA TTCCCACCTG GCAGCCCGCG GGCACCGGCC AGGGCGCCGG CGGAGCGAGG
GCCGCCACTG GCGGTCGTGT GACCCGCGGC GGCAAGGCCC TGAAAAAACG CGGCCAGACC
TTCCAGACTC AGCACAAGGG CGTGGAGGTC GCCGCCCGCC CGGCAGGCCC CGGCCCGAAG
AAGGGCCCGC CCCGGGCCAA ATCTCGCCCG GGCAAGCGCC GGCCGCAGCG TCCGTAG
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| Protein sequence | MSAVPDFPPS LFARKPYWAK RFGTAPFLPT TREEMDDLGW DSCDIVLVTG DAYVDHPSFG
MAIIGRLLEA QGFRVGIIAQ PDWTSAEPFR ALGRPNLFFG VTAGNMDSMV NHYTADRKIR
SNDAYTPGDV HGHRPDRAVI VYAQRAREAY KDVPVVAGGI EASLRRIAHY DYWQDKVRRS
VLLDARADIL LFGNAERALV ELAHRVAAGE HPREITDLRG TAFLRDAVPA GYVELDSSEV
DTPGPVDANP DPYAMVSPST CAEAETKAES EDTAGEGGAQ VVRFHRDIPR GTPRDKTVIR
IPAFEQVKGD SVLYAHASRV LHLETNPGNA RAIVQRHGDK EVWLNPPPIP LTTAEMDAVF
DLPYARAPHP SYGDARIPAW EMIRFSVNIM RGCFGGCTFC SITEHEGRII QSRSEESVLK
EIEEIRDKVD GFTGVVSDLG GPTANMYRLA CKDPEIERSC RRLSCVYPGI CKNLDTDHTP
LVNLYRKARA LPGIKKILIA SGLRYDLAVE SPEYVKELVT HHVGGYLKIA PEHTESGPLS
RMMKPGMGAY DRFKAMFEKY SKQAGKEQYL IPYFIAAHPG TSDEDMLNLA LWLKRNNFRA
DQVQAFLPSP MALATAMWHS GRDPLRGIKR KAGDRVPVAR GARARRLHKA FLRYHDPNNW
PLLRDALKRM GRADLIGNGK HHLIPTWQPA GTGQGAGGAR AATGGRVTRG GKALKKRGQT
FQTQHKGVEV AARPAGPGPK KGPPRAKSRP GKRRPQRP
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