Gene TK90_1480 details

Gene Information

• Locus tag: TK90_1480
• ID: 8807246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. K90mix
• Kingdom: Bacteria
• Replicon accession: NC_013889
• Strand: -
• Start bp: 1572414
• End bp: 1575893
• Gene Length: 3480 bp
• Protein Length: 1159 aa
• Translation table: 11
• GC content: 66%
• Product: DNA polymerase III, alpha subunit
• Protein accession: YP_003460720
• Protein GI: 289208654

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.563322
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGGCG CATGGCACGA CCCCGGTTTT GTGCACCTGA GGGTGCACTC CGAGTACTCG 
CTGATCGACG GGCTGGTGCG CCTGAAGCCG CTGGTCGCGG CGGTCGCGGA GAAGGGCATG 
CCCGCGGTCG CGGTGACCGA TCACTGCAAC CTGTTCGGAC TGGTGAAATT CTACCGGGCG 
GCCATTGCCC AGGGCGTGCA GCCGATCATC GGGGCCGATC TGCTGGTGCG GGACGCCCGC 
GCAGACGGGA GCGTGGCGCG CATGACGCTG CTTGCGCAGA ACGACCCCGG CTACCGCAAC 
CTCACCCGAC TGATCTCGCG GGCCTGGCAG GAAGGTCAGG AAAAGGGCAT CCCTCGGATC 
GACGCGGAAT GGCTGGATAG CGCGGCCGAG GGCCTGATCG CGCTGTCGGG TGGCATCGAT 
GGTCTGTTCG TGAGCGGCTC GGGCGTCGCG CGCGTATTGA CCCACGATGA TCTTGCCCCC 
TGGCTGAAGC GTTTTCCCGG GCGCTTCTAT CTGGAGCTGA CGCGCACCGA GCGCCCGGGC 
GAGGAGGCCT GGATCGAGCA GGCCCTCGCG GCGGCGGAAC AATTCGAGCT GCCCGTGGTG 
GCGACCAACG ACGTTCGCTT CCTGAAGGCC GAGGACTTCG AGGCCCACGA GGCGCGCGTC 
TGTATCCATG ATGGCACCAC GCTGGATGAC CCCTCGCGCC CGCGGCGCTA CTCCGAGCAT 
CAGTACCTCG CCACCCCGCA GGAGATGACG GAACGCTTCT CGGATATCCC CGAGGCCCTG 
GCGAACTCGG TGGCGATCGC CCGGCGCTGC AGTGTCAGCC TGACGCTCGG GGAGTCGGTG 
TTGCCGGATT TCCCGGTGCC GGAGGGCTAC ACGGTCGAGG ATCATCTGCG CGAGACCTCG 
GCGAAGGGGC TCGAGGCCCG GCTGGAACGT TTTCAGTTTG CCGAGCGCTC GGAGTACGAG 
GAACGCCTGA AGCTCGAACT GGACGTGATC TGCCAGATGG GTTTCCCCGG CTACTTCCTG 
ATCGTGGCCG ACTTTATCCA GTGGGCCAAG GACAATGGCA TTCCGGTGGG GCCGGGGCGT 
GGATCGGGCG CGGGTTCACT GGTCGCCTAT GTGCTGGGTA TTACTGATCT GGATCCATTG 
CGTTACGAGC TGCTTTTTGA GCGATTTCTT AATCCAGAGC GCGTGTCCAT GCCTGACTTC 
GATGTCGATT TCTGCATGGA GAAACGCGAT GACGTGATCG ACTACGTGGC CGAGCGCTAC 
GGGCGCGACA AGGTCTCGCA GATCATCACC CACGGCACCA TGGCCGCGAA GGCGGTCGTG 
CGCGACTGTG GTCGTGTACT GGGCTATGGC TACGGATTTG TCGACCGCAT CGCCAAGCTG 
ATCCCGTTCG AGCTGGGCAT GACCCTGGAC AAGGCCCTGG CCGAGAGCGA GGACCTGAAG 
TCGCAGTACG ATCAGGACGA GGAGGTGCGC GGGATCATCG ATCTGGCGCG CAAGCTCGAG 
GGACTCACCC GCAATGCGGG CAAGCACGCC GGCGGCGTGG TGATCGCCCC CTCGGCGCTG 
ACCGACTTCT CGCCACTGTA CTGCGAGGAC GATGGTGGCT CGCTGGTGAC CCACTTCGAC 
AAGGACGACG TCGAGGCCGT GGGTCTGGTG AAGTTCGACT TTCTGGGGCT GCGCACGCTG 
ACGATCATCG ACTGGGCGGT CGAGAACGTG CGCAAGATGG ACCCCGAGAC CCGTATCGAC 
CTGGATGCGG TCCCGCTGGA TGACCCCGAC ACCTTCAAGC TGCTGAAGGC CTACCAGACC 
ACCGCGGTGT TCCAGCTGGA ATCGGGCGGG ATGAAGGACC TGATCCGGCG CCTGCAGCCG 
GACAGCTTCG AGGACATCAT CGCGCTGGTG GCCCTGTACC GGCCGGGCCC GCTGCAGTCG 
GGGATGGTGG ATGACTTCAT CGACCGCAAG CATGGTCGCG CGCAGGTGGA ATACCCGCAT 
CCGGATCTGG AGCCGATCCT GCAGCCGACC TACGGGGTCA TCCTGTACCA GGAGCAGGTG 
ATGCAGATCG CCCAGGTCCT GGCGAACTAT ACGCTCGGCG GCGCTGACCT GCTGCGACGC 
GCGATGGGCA AGAAGAAGCC CGAGGAGATG GCCAAGCAGC GCCAGATTTT CATGGAGGGT 
GCGCTGGGGC GCGGGGTCGA GGAGGGGACC GCGACCTATA TCTTCGACCT GATGGAGAAG 
TTCGCCGGCT ACGGCTTCAA CAAGTCGCAC TCGGCCGCCT ATGCCCTGGT TGCGTATCAG 
ACCGCCTGGC TGAAGGCGCA TTACCCGGCG CCGTTCATGG CCGCGGTGTT GTCCGCGGAT 
ATGGACAACA CCGACAAGGT CGTGGGCCTG ATCGAGGAAT GCCGGAACAT GGGCCTGGAG 
GTCCTGCCGC CGGACGTGAA CCAGTCGGAC TACCGCTTTA CCTGCCGCGA TGCCGGGACG 
GTGGTCTATG GCCTCGGGGC GATCAAGGGT GTGGGCGAGT CGGCGATCGA GACACTGCTG 
AAGGCGCGTG CGGTGGATGG TCCCTTCCAC GGGCTGATCG ACCTGTGCCA GCGCGTGGAC 
CTGTCCAAGC TGAACAAGCG CGTGCTGGAG ACGCTGGTGC GTGCGGGTGC GCTGGATGCG 
ATCGGCGCGA ACCGCGCGAC GCTGCTGAAC GACATCCCCA CCGCCGTGGC CGCGGCGGAG 
CAGACCGAGC GCAACGCGAG CCTGGGGGTG GTGGATCTGT TTGGCGACCC GGCGGCGGCC 
GTGGTCCCCG AGAGCGAGAC CCTCCCGGAA ATGGAGGATG ATGACCGCCT GCGCGGGGAG 
AAGGAGACGC TGGGCCTGTA CCTGACCGGG CACCCGGTCG AACGCTATCG TGCAGAACTC 
AAGCGGCTGA CGGGCAGCAC GTTCGCCGAA CTGGAGGCGA AGCTGGAGCA GCGGCCCGAT 
GAGGGTGGCC AGCAGGGGCG GCGCGGGCGG CAGGAGACGG TGCGCATTGC CGGCCTGGTC 
GTGGGGGTGC GAGTGCGCAA CACGCAGAAC GGGCGCATGG GCATCGCGAC CCTGGATGAC 
CGCAGCGGGC GTGCCGAGAT CGTGCTGTTC AACGACGACT TCACCACGTA CCGCGATCGG 
CTGGAGCCGG ACACCCTCCT GGTGGCCGAG GGCACGGTGG CGCTGGATGA CTATGCCGGC 
GGTATCCGCA TGCGGGCCCG GGCGGTGTAC ACGCTGGACG AGGCTCGGGC GCAGTGGGCA 
CGCGCTCTGC ACCTGTGTCT GGAGGGGGTG CGTGCCGAGC AGGTAGAGAA CCTGCGCGGC 
CTGATGCAAG AACATCGCGA TGGCCAGTGC CGAGTCCACC TGTGCTACCG CCGGGACGGC 
CTCGAGGCCG AACTGAGTCT GCCCGAGGGC TGGGCCATCC GTCCGGACGA GCGGTTGCTG 
CGCAACCTGC AGCAGACCCT GGGGCCGGGT TGCGAGGCCC AGGTCCTGTA CGGCCGGTGA 

 

Protein sequence

MSGAWHDPGF VHLRVHSEYS LIDGLVRLKP LVAAVAEKGM PAVAVTDHCN LFGLVKFYRA 
AIAQGVQPII GADLLVRDAR ADGSVARMTL LAQNDPGYRN LTRLISRAWQ EGQEKGIPRI 
DAEWLDSAAE GLIALSGGID GLFVSGSGVA RVLTHDDLAP WLKRFPGRFY LELTRTERPG 
EEAWIEQALA AAEQFELPVV ATNDVRFLKA EDFEAHEARV CIHDGTTLDD PSRPRRYSEH 
QYLATPQEMT ERFSDIPEAL ANSVAIARRC SVSLTLGESV LPDFPVPEGY TVEDHLRETS 
AKGLEARLER FQFAERSEYE ERLKLELDVI CQMGFPGYFL IVADFIQWAK DNGIPVGPGR 
GSGAGSLVAY VLGITDLDPL RYELLFERFL NPERVSMPDF DVDFCMEKRD DVIDYVAERY 
GRDKVSQIIT HGTMAAKAVV RDCGRVLGYG YGFVDRIAKL IPFELGMTLD KALAESEDLK 
SQYDQDEEVR GIIDLARKLE GLTRNAGKHA GGVVIAPSAL TDFSPLYCED DGGSLVTHFD 
KDDVEAVGLV KFDFLGLRTL TIIDWAVENV RKMDPETRID LDAVPLDDPD TFKLLKAYQT 
TAVFQLESGG MKDLIRRLQP DSFEDIIALV ALYRPGPLQS GMVDDFIDRK HGRAQVEYPH 
PDLEPILQPT YGVILYQEQV MQIAQVLANY TLGGADLLRR AMGKKKPEEM AKQRQIFMEG 
ALGRGVEEGT ATYIFDLMEK FAGYGFNKSH SAAYALVAYQ TAWLKAHYPA PFMAAVLSAD 
MDNTDKVVGL IEECRNMGLE VLPPDVNQSD YRFTCRDAGT VVYGLGAIKG VGESAIETLL 
KARAVDGPFH GLIDLCQRVD LSKLNKRVLE TLVRAGALDA IGANRATLLN DIPTAVAAAE 
QTERNASLGV VDLFGDPAAA VVPESETLPE MEDDDRLRGE KETLGLYLTG HPVERYRAEL 
KRLTGSTFAE LEAKLEQRPD EGGQQGRRGR QETVRIAGLV VGVRVRNTQN GRMGIATLDD 
RSGRAEIVLF NDDFTTYRDR LEPDTLLVAE GTVALDDYAG GIRMRARAVY TLDEARAQWA 
RALHLCLEGV RAEQVENLRG LMQEHRDGQC RVHLCYRRDG LEAELSLPEG WAIRPDERLL 
RNLQQTLGPG CEAQVLYGR