Gene TK90_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1400 
Symbol 
ID8807166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1491542 
End bp1492669 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content68% 
IMG OID 
Productflagellin domain protein 
Protein accessionYP_003460641 
Protein GI289208575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGG TGCTGAGTGT TGCCACCAAC CTCCTGTCGC TCAATGCCCA GCGCCACCTG 
CGCCAGTCGC AGGCCGCCCT GCAGACGGCC TTTCAGCGCC TCGCTTCGGG CCAGCGCATC
AATTCGGCGC GCGACGACGC CGCCGGGCTG GCCATCTCCG AACGCTTCAC AACCCAGATC
CGCGGCCTGA ACCAGGCCAT GCGCAACGCG CAGGACGGCA TCTCGCTGGC CCAGACCGCC
GAGGGCGCCC TGGGCTCCAT GACCGGCAAC CTGCAACGTA TCCGCCAGCT GGCGGTACAG
GCGGCCAACG CCACCCTGTC GGCCTCGGAT CGTGGCGCCA TCGACCGCGA GGTTCGCCAG
CTCCTGGCCG AGAACGACCG TATCGCGACC CAGACAACCT TTAACGGCCG TTCACTGCTG
GACGGATCCA TGGGCACCGC TTTCTTCCAG ATCGGCCCCA ATGCCGGGCA GACGCTCGCC
ATCGACCTCG GCGACAGCAT GCGCAACCGC TTCGTGGGTG CCATTGCCAG CGCCTATTCC
GGCGAACTGG AGGCCGCCTT CGCCAGCGAT CCGCTGGAGG TGGATCAGGA TTTCTTCATC
CGTGTGGGCG AGCGCGACCC GGTGGAGATC CCTGCAGGCC ACTATCGCAC GCCCCAGGAA
CTGACGGCCG CGATCGACCG CGCCCTCGGA TCCACCGGAC GCGCGGTCCT GACCGACGAC
GGCCGGCTGA ATCTGATCGC CCGCGAGACC CTGACGATCT CGGGTGAGAC CGCCATCGAC
ACGCTCGGGC TGCCGGCCAC CACCGAAACC GGGGGGAGCC TGAACGATGT CGACCTGACC
ACGCGCCAAG GGGCCAGCGA TGCCCTCTCA CGTCTGGATG CCGCACTGGA CGCGGTCAAC
GCGCGGCGCA GCCAGTTCGG GGCCATCCAG AACCGCTTCG AGTCGACGAT TACCAACCTG
GGCATTACCA GTGACAACCT GGCGGCCGCC CGCAGCCGTA TCCTGGATGC CGATTACGCG
GCCGAGGTCA CCCGCCTCGT GCGCGCCCAG ATCCTGCAAC AGGCCGGAGT CGCCGTGCTC
GTTCAGGCCA ACGCGCTACC GCAGACCTTC CTGCGCCTGC TCCAGTAA
 
Protein sequence
MAQVLSVATN LLSLNAQRHL RQSQAALQTA FQRLASGQRI NSARDDAAGL AISERFTTQI 
RGLNQAMRNA QDGISLAQTA EGALGSMTGN LQRIRQLAVQ AANATLSASD RGAIDREVRQ
LLAENDRIAT QTTFNGRSLL DGSMGTAFFQ IGPNAGQTLA IDLGDSMRNR FVGAIASAYS
GELEAAFASD PLEVDQDFFI RVGERDPVEI PAGHYRTPQE LTAAIDRALG STGRAVLTDD
GRLNLIARET LTISGETAID TLGLPATTET GGSLNDVDLT TRQGASDALS RLDAALDAVN
ARRSQFGAIQ NRFESTITNL GITSDNLAAA RSRILDADYA AEVTRLVRAQ ILQQAGVAVL
VQANALPQTF LRLLQ