| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1199 |
|---|
| Symbol | |
|---|
| ID | 8806961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1275669 |
|---|
| End bp | 1276919 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| Protein accession | YP_003460444 |
|---|
| Protein GI | 289208378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.132324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCC CGCTCCCGCT CGCCATTGGT CTGCGCTATA CGCGCGCCAA GCGGCGTAAT
CACTTCATCT CGTTTATCTC GGTCGTCTCG ATCCTCGGCC TGGTGCTGGG CGTGATGGCA
CTGATCACCG TGCTCTCGGT GATGAACGGC TTCGAACGGG AGCTGCGTGA CCGCATCCTG
GGTATGGCGT CGCACGCGAC CATCCAGGAC GTGAATGGCG GTCTGCGCAA CTGGGAGTCA
CTGAAGGAGC AGGTCGAGAC GATCGACGAA CGGGTGCTGG CGGTCGCGCC GTATGTGCAG
GGCGAGGCGA TGCTCAGTGC GACCGGGAAC ATCTCCGGTG CGCTGATCCG CGGGGTAGAT
CCGGAGGCCG AGGAACGCGT GGCGCGGATC GGCGAACACA TGACCCAGGG CCGGCTCGGG
CAACTCGAAC CCGGTGCCTA CCGAATTGTG CTGGGCCGCG AGCTGGCAGC AGAACTGCGG
GTGCGCGTGG GTGACTCGCT GATCCTGATG GCGCCACAGG CCTCGGTCTC GCCAGCGGGT
GTAATGCCGC GCATGCGACG ATTCGAGGTG GCGGGAATCT TCGAGGTCGG GATGTACGAA
TACGACCGCG GGACGGCCTT CATTCACCTG CAGGACGCCC AGGCGGTCTT CCAGACGGGC
GAGAGCGTCA CCGGCCTGCG CCTGCGCCTG ACGGACATGA TGCGGGCGGG TGTGGTCTCG
CGGGAGGTGG CCAGTCAGCT CGACGGGTTG TTCCGGGTGT CCGACTGGAC GCGCCAGCAC
GCCAACCTGT TTCGGGCGAT CCAGATCGAG AAGATGGTGA TGTTCATCAT CCTGTCCCTC
ATTGTCGCGG TAGCGGCTTT CAATATCGTT TCCACGCTGA TCATGCTGGT GACCGACAAG
CAGGGGGACA TCGCGATACT GCGAACCCTT GGGCTGTCCC CCTCGGGGGT CATGCTGGTG
TTCGTGGTCC AGGGGGTCGT GATCGGCGCG ATCGGCATCT TGCTAGGCTC GGTCGCCGGC
GTCGCGCTGG CGCTCAATAT CGACGTCGTG GTGCCCTTTA TCGAACGCGC AATGGGCATC
GAGTTTCTCG CGGCAGATGT CTATTACATC AGTGACTTGC CATCGGAACT GAAAGCATCC
GATGTCTTTC GGGTGGGCGG GATTGCGTTC TTGCTGACCG TCGTGGCGAC GCTGTTCCCG
GCCTGGCGGG CGGCCCGTAC ACAGCCGGCG GAGGCCCTGC GCCATGACTG A
|
|---|
| Protein sequence | MFRPLPLAIG LRYTRAKRRN HFISFISVVS ILGLVLGVMA LITVLSVMNG FERELRDRIL
GMASHATIQD VNGGLRNWES LKEQVETIDE RVLAVAPYVQ GEAMLSATGN ISGALIRGVD
PEAEERVARI GEHMTQGRLG QLEPGAYRIV LGRELAAELR VRVGDSLILM APQASVSPAG
VMPRMRRFEV AGIFEVGMYE YDRGTAFIHL QDAQAVFQTG ESVTGLRLRL TDMMRAGVVS
REVASQLDGL FRVSDWTRQH ANLFRAIQIE KMVMFIILSL IVAVAAFNIV STLIMLVTDK
QGDIAILRTL GLSPSGVMLV FVVQGVVIGA IGILLGSVAG VALALNIDVV VPFIERAMGI
EFLAADVYYI SDLPSELKAS DVFRVGGIAF LLTVVATLFP AWRAARTQPA EALRHD
|
|---|
| |