Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1184 |
Symbol | |
ID | 8806946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1259290 |
End bp | 1259775 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | CheW protein |
Protein accession | YP_003460429 |
Protein GI | 289208363 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0668983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCG CACAAGACGT AGAAGCGATG GCCAAGGCCG ATACGGCCCC GTATGTGACG TTCAGTCTCG CGGAGGAGAC CTACGCGATT GACGTCCTGC AGGTGCAGGA GGTGCTGAAG GTCACCGAGA TCGCGCCCGT GCCCGGTGTG CCGGATTATA TCCTCGGCAT CATCAACTTG CGGGGCAACG TCGTGACCGT GATCGACGCG CGCAGGCGCA TGGGGCTGGA CGATCGCGAG CCAGACGAAG CCTCGCGCAT CGTGATCATC GATGTCGACA ACCAGAATGT CGGCATCCTG GTGGACTCGG TCTCGGAGGT TGTAAGGATC TCGCTGGATT CGGTCGAGCC TGCTCCGGAA GTCGGGAACG ACGACAGTTC GCGGTTCATC CAGGGGGTCA CGAGCACGGA GCAGGGGCTG ACGATCCTGG TTGACCTGAA CAAGCTCCTT TCCGACGAGG AATGGGCGCA GCTGCGGGAG CTGTAG
|
Protein sequence | MSSAQDVEAM AKADTAPYVT FSLAEETYAI DVLQVQEVLK VTEIAPVPGV PDYILGIINL RGNVVTVIDA RRRMGLDDRE PDEASRIVII DVDNQNVGIL VDSVSEVVRI SLDSVEPAPE VGNDDSSRFI QGVTSTEQGL TILVDLNKLL SDEEWAQLRE L
|
| |