| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1160 |
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| Symbol | |
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| ID | 8806922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1236878 |
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| End bp | 1237579 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Flagellar assembly protein FliH/Type III secretion system HrpE |
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| Protein accession | YP_003460405 |
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| Protein GI | 289208339 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00966123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGTCCC GTCCCGGCGC TCAGGTGCGG GTCCATGACC CCGACGCGTC GGTTTGGGAA
CCGCCGGAGA TTGGCGATGA AGGGCTGCGT CCGGCGCGAA GGCTGCCAAC GGCCGCCGAG
ATCGAGGCGA TCGAGGAACA GGCGCGTCAG AATGGGTTCG AGGCCGGATA CGCCGAAGGC
CACGAGGTCG GGAAACAGGA GGCCGAGAAG GCCGCGCGGG CAAAGGCGGA CAAGCAGCTG
CGCGAGACGG TGGCCAAACT GGAATCACTG GCAGGCGGTC TGACCGACCC GTTGGCCGCA
GCCGCCGACC AGCTGGAGCC GGAGCTCCTG ACCTTGACCG TCGCCCTGGC CCGCAAGGTG
CTGGCTGCGG AGCTGGAGAC GCGACCGGAA CTGATCGAAC AGGTGTTGCA TCAGGCCTTG
GAACAACTGC CTGGGCGGAG TCAGGAAGTG CGGGTGCATG TTCACCCGGA TGATCGCAGT
TTGCTGGACG AATATGCCCA GTCGCTGGAT ACGCGGGTGC GCTGGGTCGC GGATACCACC
CTTGCGCGGG GTGGCTGCCG CGTCGAGTCG GGCGCGGCGT CTGTGGACGC CTCGCTGGAG
CGCCGCCTGC AACAGGCGGT AGAGGCGGTC TGGGGCGATC TGGCCGAACC TGCCCGTCCG
GCGGCGCCCG AGGATGCTTC GGCATCGGAG GATGATTCAT GA
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| Protein sequence | MTSRPGAQVR VHDPDASVWE PPEIGDEGLR PARRLPTAAE IEAIEEQARQ NGFEAGYAEG
HEVGKQEAEK AARAKADKQL RETVAKLESL AGGLTDPLAA AADQLEPELL TLTVALARKV
LAAELETRPE LIEQVLHQAL EQLPGRSQEV RVHVHPDDRS LLDEYAQSLD TRVRWVADTT
LARGGCRVES GAASVDASLE RRLQQAVEAV WGDLAEPARP AAPEDASASE DDS
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