| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1152 |
|---|
| Symbol | |
|---|
| ID | 8806914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1225721 |
|---|
| End bp | 1226140 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function UPF0047 |
|---|
| Protein accession | YP_003460397 |
|---|
| Protein GI | 289208331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.916503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00000047058 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTC ATCAGGAAAC CCTCCGCGTA CGAACCGAGG GGCGCGGGAC CCTCAACATC
ACGCGTCAGA TCGAGGAGAT CGTTCGCGCC AGCGGCATCA CGACCGGCAC CTGTCACGTC
TTCCAGCACC ACACCAGCGC CTCGTTGCTG GTGACCGAGA ACGCCGATCC TGATGTGCGG
CATGACCTGG AAACCCTGAT CGCACGCATG GCACCGGACG GCGATCCCGC ATACCGGCAC
GACATGGAAG GCGACGACGA CATGGCCGCC CACGCTCGCG CCATGCTGAC CCACAACGAC
CTGACCGTGC CGGTCGGGCG CGGCCGGCTG ATCCTGGGTA CCTGGCAGGG CCTGTTTCTG
TGGGAGCACC GCTACGCCGC GCACACCCGC ACGCTGACTG TGACGGTCCA CGGAGAGTGA
|
|---|
| Protein sequence | MAIHQETLRV RTEGRGTLNI TRQIEEIVRA SGITTGTCHV FQHHTSASLL VTENADPDVR
HDLETLIARM APDGDPAYRH DMEGDDDMAA HARAMLTHND LTVPVGRGRL ILGTWQGLFL
WEHRYAAHTR TLTVTVHGE
|
|---|
| |