Gene TK90_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1136 
Symbol 
ID8806896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1210150 
End bp1212198 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content60% 
IMG OID 
Productputative ATP-dependent Lon protease 
Protein accessionYP_003460382 
Protein GI289208316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.541958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value4.32292e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTAG AGCTTGATGA CATCGACCGC CGGGCGGTGA GCGCCCTTGA CGGGTATCTG 
GTACGCAAGG ATCTCGTGCG CACGTTCAGT CGGCAGTTTC CGGTGCCGAC CTACGTGGTC
GAGTTCTTGT TGGGGCGCTA CTGCGCCAGC GTCGACGAGG AAGAGATTCA GGAAGGACTG
GAGATTGTTC AGCGCCAGCT TCAATCGCGC ACGGTGAAGG CCGGGGAGGA GGAGCTCTTT
AAGTCCCGAG CGCGCGAAGA AGGCGAGATC AAACTGATCG ACATGATCAC GGCCCGCCTG
GACACCAAGA CCGATACCTA CGTGGCGACG CTTCCCAGCT TGCGCATCAA GGACGCTCGC
ATCACGCCCG AAATGGCTAA TGGGCATGAG CGGATGTTCA CCGGTGGCTT CTATGCCGAG
ATCACGCTCG GTTACGACGC TTCCATCGCT GCGGAGCAGA ACGGCCGGCC GTTTGGCATC
GAGGGGCTTC GCGAGATTCA GCTCTCCAGC CGAGACGTGC TGGAGAAGCT AGGGGACGCA
CGTAAGCAGT TTACGACCGA GCAGTGGAAG AACTTCTTGC TCCGCTCGAT CGGGATCGAA
CCCGGTAGCT TGAGCGATCG TGAGAAAGAC GCACTGATGT TGCGCATGGT TCCCTTCGTT
GAGCGTAACT ACAACCTGGT GGAGCTGGGG CCGCGGGGCA CGGGCAAGAG CCATCTGTTC
CAGCAGGTAT CGCCCTACGC GCATCTGATC TCGGGCGGCA AGGCGACGGT CGCCAAGATG
TTCGTAAACA ACGCCAATGG TCAGCGCGGC CTGGTTTGTC AGTACGACGT GGTCTGCTTC
GACGAGGTCT CCGGTATCTC CTTCGACCAG AAGGACGGTG TGAACATCAT GAAGGGCTAC
ATGGAGTCCG GTGAGTTCAG CCGTGGGAAG GAGAGCATCC GGGCGGATGG GAGCATCGTG
CTCGTCGGAA ATTTCGAGGT GGACGTTGAG CATCAGCAGC GCGTCGGGCA TCTGTTCGGA
CCGATGCCAC CGGAGATCAA GGATGACACC GCCTTCATGG ACCGCATCCA TGCCTTCCTT
CCGGGCTGGG ACGTACCGAA GGTGCGCAAG GAGATCCTGA CGGACCATTT TGGTCTGGTA
AGCGATTTCC TGTCGGAGTG CTGGAGTCAG CTTCGCGCCC AGAGCCGGGT GGCGACCATC
CAGGATCGGG TGCGTTTCGG CGGGGCATTA TCGGGGCGCG ACACCAATGC CGTTAACAAG
ACGATAAGCG GCTTGCTCAA GCTACTCTAT CCCGCTAACG GCCAGGTTTT GGACGAAGAT
CTGGAATGGG CCGCGCGTCT CGCACTAGAA GCGCGGCGCC GCGTGAAGGA ACAGCAAAAA
CGCATCGGCG CCGCAGAGTT CCGGAATACG CACTTCAGCT ATGTGATGGG AGACGATGGC
GTCGAGCAGT TCGTCTCGAC GCCCGAGCTG CAAAGCGAAG GGGGGATCGG AGACGATCCG
CTGGAGCCCG GCCAGGTCTG GACAATCAGT CCTGGCACTG GCGAAGAATA CCCGGGTCTA
TTTCGAATCG AGGCGAACGA AGGTCCAGGA AGCGGCGTCA AGATTCTCAA TAAGCCTGTG
CCCCCCGCCT TCAAGGAGAG CATGGGGTTC GCCGAGCAGA ATCTATACGC CCGTGCCAGC
CAGCTCGTAG GCGATAAGGA TCCGCGCCAA CATGAGTTCA CCGCACAGCT GCGGGGTTTC
GACGCTGCGA AGTCGGGTGC GAAGGTGGGT ATGGCTGGCC TGATCGCGCT GTGCACATCG
CTGCTCAAGC GCAGTGTGCG CGGTGGCCTG ATTGTGGTCG GCGAAATCAA CCTGGGGGGT
TCCATAGAGC CGGTTCACGA CGCCATCAAC ATGGTCGAGC TGGCGGTGGA AAAGGGCGCT
TCCGTGGTGA TGATGCCGGT CACGTGCCGT AAGCAGCTTT TTGATCTCTC CGACGATATG
GCGACGAAGG TCGACATCCA GTTCTACTCG GATGCGCGCG ATGCGCTGAT TAAGGCGATC
GCCGATTGA
 
Protein sequence
MTVELDDIDR RAVSALDGYL VRKDLVRTFS RQFPVPTYVV EFLLGRYCAS VDEEEIQEGL 
EIVQRQLQSR TVKAGEEELF KSRAREEGEI KLIDMITARL DTKTDTYVAT LPSLRIKDAR
ITPEMANGHE RMFTGGFYAE ITLGYDASIA AEQNGRPFGI EGLREIQLSS RDVLEKLGDA
RKQFTTEQWK NFLLRSIGIE PGSLSDREKD ALMLRMVPFV ERNYNLVELG PRGTGKSHLF
QQVSPYAHLI SGGKATVAKM FVNNANGQRG LVCQYDVVCF DEVSGISFDQ KDGVNIMKGY
MESGEFSRGK ESIRADGSIV LVGNFEVDVE HQQRVGHLFG PMPPEIKDDT AFMDRIHAFL
PGWDVPKVRK EILTDHFGLV SDFLSECWSQ LRAQSRVATI QDRVRFGGAL SGRDTNAVNK
TISGLLKLLY PANGQVLDED LEWAARLALE ARRRVKEQQK RIGAAEFRNT HFSYVMGDDG
VEQFVSTPEL QSEGGIGDDP LEPGQVWTIS PGTGEEYPGL FRIEANEGPG SGVKILNKPV
PPAFKESMGF AEQNLYARAS QLVGDKDPRQ HEFTAQLRGF DAAKSGAKVG MAGLIALCTS
LLKRSVRGGL IVVGEINLGG SIEPVHDAIN MVELAVEKGA SVVMMPVTCR KQLFDLSDDM
ATKVDIQFYS DARDALIKAI AD