| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1060 |
|---|
| Symbol | |
|---|
| ID | 8806818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1119430 |
|---|
| End bp | 1120515 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003460308 |
|---|
| Protein GI | 289208242 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG GCGATGGACC GGTTCGTGGC CGCGGTGCGA CGATCCAGCC CCTGGCACGC
TTCGAGACCA CGCACTGCGA GCCGTTCGAC GATGGCTGGG TGGGCGATGA CGAGGAGCCC
CGGTCGCTGC GTACCGAAGT GACGCCGGAG CACCCGCGCA CTGTCCTGTC CTGGAACCAG
TCCCCGGATG TCCCGTTCGA GCTGTCCCTG AACCCCTATC GCGGCTGTGA ACACGGGTGT
GCCTACTGCT TCGCACGGCC GGCGCATGCC TATGTCGGAC TATCGCCAGG GCTGGATTTC
GAGAGCCGGC TGTTCGCCAA AGTCGGCGCA GCGGATTGCC TGCGCCGCGA ACTGGCCCGG
CCCGCGCATC GCGTGACGCC GCTGGCGCTG GGCATCAACA CGGACGCCTA CCAGCCGGTG
GAACGCGAGT GGCGCATCAC GCGAGAGGTC CTGGAGGTGC TGGCCGAGGC GTGTCATCCC
GTGTCCATCG TTACGAAGTC CGCGCTGGTG GAGCGCGACC TGGACCTGCT GGGGCCCATG
GCCGAGCAGG GGCTGGTACA GGTGGCGATT TCCGTGACTA CCCTGGACCG GGTGTTGTCC
CGACACCTGG AACCCCGCGC GGCCGCCCCC CAGCGACGTC TGGAGACCAT GCGTCGTCTG
AGCGAGGCCG GAGTGTCGGT CGCGGTGCTG GTGGCACCCC TGATCCCGGT TCTGACCGAT
GGCGAACTGG AATCGCTGCT GGATGCGGCA CGCGAGGCCG GTGCCACGAG CGCCGGGTAC
GTACTGCTGC GCCTGCCGCG GGAGGTGGCG CCGCTGTTCG AGGACTGGCT GCGCACGCAT
CACCCACTGA AAGCGGACCA TGTGCTGCAG CGGCTGCGTG AGGCGCATGG GGGCCGACTG
TATGACTCGA CTTTCGGGCA CCGCATGGTT GGCACGGGCC CGTATGCCGC ATTGCTGCGT
CAGCGCTTTC GGCTGGCCCG GCGCCGGGCG GGTCTGGCGG GGCGTCTTGC GGAGCTGGAT
ACCACGCGCT TTCATCCGCC CGCCGCGCCG AAGGCCGAGC GCGACCCACA GCTGGATCTA
TTCTAG
|
|---|
| Protein sequence | MSQGDGPVRG RGATIQPLAR FETTHCEPFD DGWVGDDEEP RSLRTEVTPE HPRTVLSWNQ
SPDVPFELSL NPYRGCEHGC AYCFARPAHA YVGLSPGLDF ESRLFAKVGA ADCLRRELAR
PAHRVTPLAL GINTDAYQPV EREWRITREV LEVLAEACHP VSIVTKSALV ERDLDLLGPM
AEQGLVQVAI SVTTLDRVLS RHLEPRAAAP QRRLETMRRL SEAGVSVAVL VAPLIPVLTD
GELESLLDAA REAGATSAGY VLLRLPREVA PLFEDWLRTH HPLKADHVLQ RLREAHGGRL
YDSTFGHRMV GTGPYAALLR QRFRLARRRA GLAGRLAELD TTRFHPPAAP KAERDPQLDL
F
|
|---|
| |