| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1046 |
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| Symbol | |
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| ID | 8806804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1105229 |
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| End bp | 1107112 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003460294 |
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| Protein GI | 289208228 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.835563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT CCCCCTCCTT CGCCGAACTC GGCCTGTCCG AGTCGTTGGC CCGTGCCCTG
TTGCAACTGG GCTTCACCAC CCCGACCCCG GTCCAGGCCG CGTGCATCCC GGCCCTGCTG
GCCGGCGACG ACGTGCTGGG CGAGGCCCAG ACCGGCACCG GCAAGACCGG CGCCTTCGGC
CTGCCGCTGA TCGACTCGAT CGATCCCGCG CAGCGTCGCG TGCAGGCGCT GATCCTCGCG
CCGACCCGCG AGCTGGCCGG CCAGGTCGCC ACTGCCCTGG AGGGCTTCGC GGCCAGCATC
GACGGGCTCG AGATCCTGCC GGTCTACGGC GGCCAGCCGA TGGGCGTGCA GATCCGCGCC
CTGCGCGATG GTGCGCAGGT CGTGGTCGGG ACGCCCGGCC GCGTGGTTGA CCACATCAAG
CGCGGCACGC TGACACTGGA TGCGCTGCGC ATGGTGGTGC TGGACGAGGC CGACGAGATG
CTGCGCATGG GCTTTGTGGA GGAGATCGAA TGGATCCTCG AACAGACCCC GGCCGAGCGC
CAGACCACGC TGTTCTCCGC GACCATGCCG GCACCGATCC GCCGTATCGC GCACCGCCAC
ATGCGCGAGC CGCAGGAAAT CCGCATTGGC GCGGGCAACG AGGCCGGCAC CGACATCGAC
CAGAGCTACT GCCTGGTCGA CCAGCGCCAC AAGACCGAGG CCCTGGGCCG GATGATCGAG
GTGGAAGCGG GACTGGACGC AGCGATCGTG TTTGCCCGTA CCAAGGCCGC GACCGCGGAG
ATCGCCGAGG CCCTGAATGC CCAGGGCGTG CAGTCCTCCC CGCTTAATGG CGACATGGAA
CAGGGCGAGC GCGAGCGCGT AGTCGCCGAC CTGCGCGATG GCCGTCTGGA CGTGATCGTG
GCCACCGACG TGGCCGCCCG CGGCATCGAT GTCCCGCGCA TCACCCATGT CTTCAACTAC
GACGCCCCGG GCGATGCCGA GGTGTACGTG CACCGCATCG GCCGCACCGG CCGCGCCGGA
CGCAAGGGCC GTGCGATCCT GTTCCTGGAG CCGCGCAAGC GGCGCATGCT GCGCGATATC
GAACGCCTGA CCGGCAAGCC CGTGCGCGAG CAGAAGGTCC CGGATCGCGC CGCCGTGATC
GCCCGCCGCG AGGAGCGCCT GGCCGAACGC CTGCAGGCCG AGCTGGCCGG CGAAGCATCG
CCACAGCTCG ACGCCCTGCT GGACCGACTG CTGGCCAACG GCCAGATGGG CGAACGCGAT
CTCGCCCGCG CCCTGCTCGC CCTGGCAACC CAGGGCACGC CGCTGGATGG CACGCCCAAC
GCGCACGACC CGGTGACGGC GGCCGCCAGC CGACCCGAGC GCGACAGTCA TCGTGCGGAT
CGCAACCGTG ACCGCGCCCC CCGCCCCAGC CGCGGCAAGG ACCGTGGGCC GGAAGCGGAC
ATGGTGCGCT ACTACATGCC GGTCGGTCGC AATCACGGCA TCGCGCCCGG CGCGATTGTC
GGCGCGCTGG CCAACGAGGG TGGCCTGAAC GGCCGCGACA TCGGCCGGAT CGGCCTGCAG
GACGACCACA GCCATGTGGA CCTGCCGGCC GCGCTGGACG AGGCCGCAGT GCGCCGACTG
GGCAATATCC ATGTCGCCAA CCGTCGCCTG GAGATGGCGC GCTCCGTGCC GACCCGGGAC
TCGCGTGCGA CCGAGCGCCA CGCCCCGGCC GCGCGCAAGC CCCGTGGTCC CGGCAAGCCG
GCCGCCAAGC GGCGCGGCCC GGCCCCGGCC AACGGCAAGC GCCCGGCCTA TGCGGCTGCC
GGAAAGCCGC GCAAGGCGCC GAGCCGCAAG GCCGCCGACA GCCGCGGTGA CGGCACCCTG
TCGGTCAAGC GCCGCTCCGC CTGA
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| Protein sequence | MSESPSFAEL GLSESLARAL LQLGFTTPTP VQAACIPALL AGDDVLGEAQ TGTGKTGAFG
LPLIDSIDPA QRRVQALILA PTRELAGQVA TALEGFAASI DGLEILPVYG GQPMGVQIRA
LRDGAQVVVG TPGRVVDHIK RGTLTLDALR MVVLDEADEM LRMGFVEEIE WILEQTPAER
QTTLFSATMP APIRRIAHRH MREPQEIRIG AGNEAGTDID QSYCLVDQRH KTEALGRMIE
VEAGLDAAIV FARTKAATAE IAEALNAQGV QSSPLNGDME QGERERVVAD LRDGRLDVIV
ATDVAARGID VPRITHVFNY DAPGDAEVYV HRIGRTGRAG RKGRAILFLE PRKRRMLRDI
ERLTGKPVRE QKVPDRAAVI ARREERLAER LQAELAGEAS PQLDALLDRL LANGQMGERD
LARALLALAT QGTPLDGTPN AHDPVTAAAS RPERDSHRAD RNRDRAPRPS RGKDRGPEAD
MVRYYMPVGR NHGIAPGAIV GALANEGGLN GRDIGRIGLQ DDHSHVDLPA ALDEAAVRRL
GNIHVANRRL EMARSVPTRD SRATERHAPA ARKPRGPGKP AAKRRGPAPA NGKRPAYAAA
GKPRKAPSRK AADSRGDGTL SVKRRSA
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