Gene TK90_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1031 
Symbol 
ID8806788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1094116 
End bp1094937 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID 
Product2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 
Protein accessionYP_003460282 
Protein GI289208216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA TCAAGAGCAT CATCGAGACC GCCTTCGAAA GCCGCGCCGA GATCAACCCG 
CGCAACGTGG AAACCAACGT GCGTGATGCC GTGAACGAGG CCATGGCGAT GCTCGACAGC
GGCCAGGCCC GCGTTGCCGA GAAAAAGGGT GGCGACTGGG TCGTCAACGA GTGGCTGAAG
AAGGCCGTGC TGCTGTCGTT CCGCATTGCC GAGAACGAGT TCATCAAGGG TGGCTTCACC
AACTACTACG ACAAGGTGCC GTCCAAGTAC GCCGACACCT CCAGCCGCGA CTTCCGCGAG
GGCGGTGTGC GCGTCGTGCC GCCGGCCACC GCCCGTCGCG GCAGCTACAT CGCTCCCAAC
GTGGTGCTGA TGCCCTCCTA CGTGAACATC GGCGCCTATG TTGACGAAGG CACCATGGTG
GACACCTGGG CGACCGTCGG TTCCTGCGCC CAGATCGGCA AGAACGTGCA CCTGTCCGGC
GGCGTCGGCA TCGGTGGCGT GCTGGAGCCG CTGCAGGCCG CCCCGACCAT CATCGAAGAC
AACTGCTTTA TCGGTGCGCG CTCCGAGGTG GTCGAGGGTG TGATCGTGGA GGAAGGCGCG
GTGATCTCCA TGGGCGTGTA CCTCGGCCAG TCCACCCGCA TCTACGACCG CGAGAACGAT
GAGATCCTGT ACGGCCGTGT GCCGGCCGGC GCGGTGGTGG TGCCGGGCAA CCTGCCGTCC
AAGGATGGCA AGTATTCGCT GTACTGCGCG GTCATCGTGA AGCGCGTGGA CGAGAAGACC
AAGGCCAAGG TCGGCCTGAA CGCCCTGCTG CGCGATGTCT GA
 
Protein sequence
MSDIKSIIET AFESRAEINP RNVETNVRDA VNEAMAMLDS GQARVAEKKG GDWVVNEWLK 
KAVLLSFRIA ENEFIKGGFT NYYDKVPSKY ADTSSRDFRE GGVRVVPPAT ARRGSYIAPN
VVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQAAPTIIED
NCFIGARSEV VEGVIVEEGA VISMGVYLGQ STRIYDREND EILYGRVPAG AVVVPGNLPS
KDGKYSLYCA VIVKRVDEKT KAKVGLNALL RDV