Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1031 |
Symbol | |
ID | 8806788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1094116 |
End bp | 1094937 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
Protein accession | YP_003460282 |
Protein GI | 289208216 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA TCAAGAGCAT CATCGAGACC GCCTTCGAAA GCCGCGCCGA GATCAACCCG CGCAACGTGG AAACCAACGT GCGTGATGCC GTGAACGAGG CCATGGCGAT GCTCGACAGC GGCCAGGCCC GCGTTGCCGA GAAAAAGGGT GGCGACTGGG TCGTCAACGA GTGGCTGAAG AAGGCCGTGC TGCTGTCGTT CCGCATTGCC GAGAACGAGT TCATCAAGGG TGGCTTCACC AACTACTACG ACAAGGTGCC GTCCAAGTAC GCCGACACCT CCAGCCGCGA CTTCCGCGAG GGCGGTGTGC GCGTCGTGCC GCCGGCCACC GCCCGTCGCG GCAGCTACAT CGCTCCCAAC GTGGTGCTGA TGCCCTCCTA CGTGAACATC GGCGCCTATG TTGACGAAGG CACCATGGTG GACACCTGGG CGACCGTCGG TTCCTGCGCC CAGATCGGCA AGAACGTGCA CCTGTCCGGC GGCGTCGGCA TCGGTGGCGT GCTGGAGCCG CTGCAGGCCG CCCCGACCAT CATCGAAGAC AACTGCTTTA TCGGTGCGCG CTCCGAGGTG GTCGAGGGTG TGATCGTGGA GGAAGGCGCG GTGATCTCCA TGGGCGTGTA CCTCGGCCAG TCCACCCGCA TCTACGACCG CGAGAACGAT GAGATCCTGT ACGGCCGTGT GCCGGCCGGC GCGGTGGTGG TGCCGGGCAA CCTGCCGTCC AAGGATGGCA AGTATTCGCT GTACTGCGCG GTCATCGTGA AGCGCGTGGA CGAGAAGACC AAGGCCAAGG TCGGCCTGAA CGCCCTGCTG CGCGATGTCT GA
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Protein sequence | MSDIKSIIET AFESRAEINP RNVETNVRDA VNEAMAMLDS GQARVAEKKG GDWVVNEWLK KAVLLSFRIA ENEFIKGGFT NYYDKVPSKY ADTSSRDFRE GGVRVVPPAT ARRGSYIAPN VVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQAAPTIIED NCFIGARSEV VEGVIVEEGA VISMGVYLGQ STRIYDREND EILYGRVPAG AVVVPGNLPS KDGKYSLYCA VIVKRVDEKT KAKVGLNALL RDV
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