Gene TK90_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0928 
Symbol 
ID8806684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp983977 
End bp984648 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content63% 
IMG OID 
Productflagellar hook capping protein 
Protein accessionYP_003460179 
Protein GI289208113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA TCTCACCCGA CATGCTGGAT CGCCTGGGCC TGTCTCGCCA GCAGAAGGAC 
GAGGGGCCCG CGGATCGCCT GGGGCAGTCC GACTTCCTCA AGCTGATGAC GACCCAGCTG
CAGAACCAGG ATCCTTTTGA ACCGATGGAG AACGGCGAAT TCATCGGCCA GATGGCGCAG
TTCTCGACGG TGACGGGCAT CGAGGAACTG TCGAAGTCGT TCGAAAAGCT GGCGCAGTCG
ATGGGGCAGA GTCAGACCCT GCAGGCGGCG TCCCTGGTCG GGAAGGACGT CTTGGTCCCG
ACGGACTTCA GCGAGCTCGG GACGGATGGA ATGGTGCGTG GGGCGGTGGA GCTGGATCAG
TCGACCGGCC AGTTGCAGGT CGAGGTGTAC AGCCCGACGG GCGAACGCAT CCGCAGCATG
AATCTTGGCT CGGCCAGTGA GGGCCTGCAG GAATTCACCT GGGATGGCAT GCGCGACGAC
GGGACCCCGG CAGCGCCGGG CGTTTACGAG TTCCGCGCAT CGGCCCAGAG CGGTTCCAGT
AGTGAATCAG TAGATGTCTT CCTCGACGCC CGCGTCGAGA GCGTTTCGGT AGGCGACGAT
TCCAGCCTGG GCCTGATGGT CCGTGGCCTG GGCGAGATCA ATTTCTCGGA TGTCCGGCGC
ATCAGCAGCT GA
 
Protein sequence
MTQISPDMLD RLGLSRQQKD EGPADRLGQS DFLKLMTTQL QNQDPFEPME NGEFIGQMAQ 
FSTVTGIEEL SKSFEKLAQS MGQSQTLQAA SLVGKDVLVP TDFSELGTDG MVRGAVELDQ
STGQLQVEVY SPTGERIRSM NLGSASEGLQ EFTWDGMRDD GTPAAPGVYE FRASAQSGSS
SESVDVFLDA RVESVSVGDD SSLGLMVRGL GEINFSDVRR ISS