| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0787 |
|---|
| Symbol | |
|---|
| ID | 8806540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 839642 |
|---|
| End bp | 840373 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003460038 |
|---|
| Protein GI | 289207972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGC GTCCGACCCA AGCCTGCGAA CACTGCACCC TGCGCCAGCT CTGCCTGCCG
ATGGGCCTAC CACAAAATGA ACTCTGGCAA CTCGACGAGA TTGTTCAACA GCGCCGTCCG
ATCGAGAAGG GGGCACTGCT GTTCAATATG GGCGAACGCT TCGAAACCCT GTTCGCCGTC
CGAACAGGCG CACTGAAAGC GGTGCTGATC AGCGACGACG GCACCGAACA GATCACTGGA
TTCGCCTTCG CTGGCGATCT CCTGGGGCTA GACGCAATCC ATTCCGGCAA GCATCCAGTC
AGTGCAGTGG CGCTGGAATC CACCAGTGTC TGCGCCGTCC CCTACGCCCA TGTGGACGAC
CTCGCCGACC GACTCCCGAC CTTTCGCCAG CACATGATGA AGGTGATGAG CAAGGAGCTG
GCCCAGGACG AAAGCCTGCA CACCCTGCTG GGACAGCGCA CGGCGGAGCA GCGTCTGGCC
ACTTTCCTGG TGACGCTGTC CGAACGGCAC CGTGCGCGTG GTCTGTCCCC CGAACGCTTC
TATCTGCCGA TGTCGCGCGC CGACATCGCC AATCACCTCG GGCTGACCCA GGAGACCATC
AGCCGCCTGT TCACGCAATT GCGCAAACAG GGCGTGATCA GCCTCCGCAC CCGGGATCTC
GAGATCCTCG AACCCAACAG CCTGCGCAAT ACCGCCGGCG TGACCTTTAC GCCTGCCGCC
AGCAGTGCCT GA
|
|---|
| Protein sequence | MTLRPTQACE HCTLRQLCLP MGLPQNELWQ LDEIVQQRRP IEKGALLFNM GERFETLFAV
RTGALKAVLI SDDGTEQITG FAFAGDLLGL DAIHSGKHPV SAVALESTSV CAVPYAHVDD
LADRLPTFRQ HMMKVMSKEL AQDESLHTLL GQRTAEQRLA TFLVTLSERH RARGLSPERF
YLPMSRADIA NHLGLTQETI SRLFTQLRKQ GVISLRTRDL EILEPNSLRN TAGVTFTPAA
SSA
|
|---|
| |