Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0668 |
Symbol | |
ID | 8806417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 708754 |
End bp | 711234 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_003459919 |
Protein GI | 289207853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.483755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0494123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCG CGAACGACAA GCCGCGGCTG GTCCTGATCG GCAACGGCAT GGCCGGCATG CGCACGGTCG AGGAGCTCTT GAAGCTCACG CCGGACATGT ACGACATCAC CGTGTTCGGC GCCGAGCCCT GGGGCAACTA CAACCGCATC ATGCTCTCGC CGGTGCTGGC CTCGGAGAAG ACCGTCGACG AGATCATGCT GAACGACGAT GCCTGGTATG CCGAACGCGG CATCACCCTG CACAAGGGCC GACGCATCGA GCGGATCGAC CGCGTGAACC GGCGGGTGAT CGCCGAGGAC GGCACCGAGG CGCCCTATGA CCGCCTGCTG CTGGCGACCG GCTCCGACCC GGTGATGATC CCGGTGCCGG GGCACGAACT GGAGGGCGTG GTTGCCTTCC GCGACATCCA CGACGTGGAC GCGATGCTCG CGGCCAGCCG CGCACACCAG CATGCGGTGG TGATCGGCGG CGGCCTGCTG GGCCTGGAGG CTGCCAACGG CCTGATGCGC CAGGGCATGG AGGTCACCGT GGTGCACCTG ATGGATCACC TGATGGAGCG CCAGCTGGAT GCCGAGGCCG CCGGGATGCT GCGCGGCTCG CTGGAGGAGC GCGGCATGCG TTTTCGCATG GCGCACCAGA CCGAGGCGAT CCTGGGCGAG GACCGCGTCA CCGGCGTGCG CTTCACCGAC GGCAGCGAGG TCGAGGCGGA TCTGGTGGTG ATGGCGGTCG GCATCCGTCC GAACACCGCG CTGGCCGAGT CCGCCGGGCT GCACTGCGAG CGCGGCGTGG TGGTGAACGA CACGATGCAG ACCTATGACC CGTCGATCTA CGCGGTCGGC GAGTGTGTGC AGCACCGCGG CGCCACCTAC GGCCTGGTCG CGCCCCTGTG GGAGCAGGCG AAGGTCTGCG CCAACCACCT GGCCGAGTAC GGCATTGGGC GCTACGAGGG CTCGATGACC TCCACCAAGC TGAAGGTGAC CGGGATCGAC CTGTTCTCCG CCGGCGACTT CACCGGCGAC GAGACCACCG AGGACCTGGT GTTCAAGGAT GCCGCGCGCG GCGTCTACAA GCGCCTGGTG CTGAAGGACA ACCGCATCCA GGGGGCCGTG CTGTACGGCG ATACCCTGGA CGGCTCCTGG TACTTCCAGC TGATGCGGGA CGGAACGCCA GTGGCCGACA TCCGCGAGAA CCTGCTGTTC GGCCAGGCGC ATATCGGCGA CTCCGGTCAT GGCGACGAGG CCTCGCGCGT GGCGGCGATG CCGGACAACG CCGAGATCTG CGGCTGCAAT GGCGTGTGCA AGGGCGAGAT CGTCCAGGCG ATCAGCGAGC ACAAGCTGTT CACGCTGGAG GACGTGCGTG CCCACACCAA GGCCTCGAAC TCCTGCGGTT CCTGCACCGG ACTGGTCGAG TCGCTGCTGG CGACCACGCT GGGCGGTGAC TACTCCGATG CCCCGGCGAA AAAGCCCGTC TGCGCCTGCA CCGATCACAG TCACGACGAG GTTCGCGCGG CGATCACCCG CGACGGCCTG AAGACCATGG ACGCGGTGTT CGAGGCCCTC GACTGGAAGA CCCCGAACGG CTGCCATGTC TGCCGTCCGG CGCTCAACTA CTACCTGCTG GCGGCCTGGC CGAAGGACTA CCAGGACGAC GCCCAGTCGC GCTTCATCAA CGAGCGCGCC CACGGCAACA TCCAGAAGGA CGGTACCTAT TCCGTCGTGC CGCGCATCTG GGGCGGGGTG ACCACCCCGG CCGAGCTGCG CGCGATCGCC GAGGTGGCCG AGCGCTACCA GGTGCCCACG GTCAAGTTCA CCGGCGGCCA GCGCATCGAC CTGCTGGGGG TGAAGAAGGC CGACCTGCCG GCGATGTGGC GCGATCTCGG CGACGCCGGG TTTGTCTCCG GCCATGCCTA CGGCAAGGCC CTGCGTACGG TGAAGACCTG TGTCGGCTCC GAGTGGTGCC GCTTTGGCAC CCAGGACTCG ACCGGACTCG GCATCCAGCT GGAACGGATG AGCTGGGGCT CCTGGACCCC GCACAAGTTC AAGATGGCGG TCTCTGGCTG TCCGCGTAAC TGCGCCGAGG CCACGATCAA GGACCTGGGC GTGGTCTGCG TGGACTCGGG CTACGAGCTG CACGTGGGCG GCAACGGCGG GGTGAAGGTG CGCGCCACCG ACTTCCTCTG CAAGGTGGAG ACCGAGGCCG AGGTGCTGGA ATATGCCGGG GCCTTCATGC AGTTCTACCG CGAAGACGCG CGCTACCTGG AACGCACCGC CCCGTGGATC GAGCGCGTCG GGCTGACCCG GGTGAAGGAA CGCCTGGTGG ACGACGCCGA GAACCGCGCG GCACTGTACG CCCGCTTCCT GGAGTCGCAG GAGGTGGCGC AGGTGGACCC CTGGGCCGAG CGGGCCGCCG GGCATGCGGC GCACGAGTTC ATTCCGATCA CGCCGGTGGA CGCGCCCCCG CGCCAGGGGG TGTCGGCATG A
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Protein sequence | MDTANDKPRL VLIGNGMAGM RTVEELLKLT PDMYDITVFG AEPWGNYNRI MLSPVLASEK TVDEIMLNDD AWYAERGITL HKGRRIERID RVNRRVIAED GTEAPYDRLL LATGSDPVMI PVPGHELEGV VAFRDIHDVD AMLAASRAHQ HAVVIGGGLL GLEAANGLMR QGMEVTVVHL MDHLMERQLD AEAAGMLRGS LEERGMRFRM AHQTEAILGE DRVTGVRFTD GSEVEADLVV MAVGIRPNTA LAESAGLHCE RGVVVNDTMQ TYDPSIYAVG ECVQHRGATY GLVAPLWEQA KVCANHLAEY GIGRYEGSMT STKLKVTGID LFSAGDFTGD ETTEDLVFKD AARGVYKRLV LKDNRIQGAV LYGDTLDGSW YFQLMRDGTP VADIRENLLF GQAHIGDSGH GDEASRVAAM PDNAEICGCN GVCKGEIVQA ISEHKLFTLE DVRAHTKASN SCGSCTGLVE SLLATTLGGD YSDAPAKKPV CACTDHSHDE VRAAITRDGL KTMDAVFEAL DWKTPNGCHV CRPALNYYLL AAWPKDYQDD AQSRFINERA HGNIQKDGTY SVVPRIWGGV TTPAELRAIA EVAERYQVPT VKFTGGQRID LLGVKKADLP AMWRDLGDAG FVSGHAYGKA LRTVKTCVGS EWCRFGTQDS TGLGIQLERM SWGSWTPHKF KMAVSGCPRN CAEATIKDLG VVCVDSGYEL HVGGNGGVKV RATDFLCKVE TEAEVLEYAG AFMQFYREDA RYLERTAPWI ERVGLTRVKE RLVDDAENRA ALYARFLESQ EVAQVDPWAE RAAGHAAHEF IPITPVDAPP RQGVSA
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