Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0645 |
Symbol | |
ID | 8806394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 684866 |
End bp | 686182 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | membrane protein involved in aromatic hydrocarbon degradation |
Protein accession | YP_003459896 |
Protein GI | 289207830 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.54968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.132324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAC GCATCATTCG CCGCAGTCTG GTGACGGTCG CGGTCGGCCT TGCAATGGGC AGCGCCGGCG TCGCCAATGC CACCAACGGC TATTTCGCGC ACGGCTATGG CACCAAGGCC AAGGGCATGG GTGGGGTCGG CATGGCCATC TCCCAGGACG CCTACGCGCC CGGAATCAAC CCCGCCGGTA TCGCCGGCAT GGAATCCCGC ATTGATGGCT CGCTCACCTA CTTCCGCCCG GAACGATCAT TCGAGGCCGG CATGCCCAGC AACCCGGCCG CGGTTGTAGC GGGTGCCCCA GCTGTGAATC CAGGTAGCGT GGATAGTGAC AGTGAGAACT TCTTTATCCC TTCTCTGGCA TTCGTCCAGC AGATCGATGA AAACCGTTCC TGGGGGCTCG CATTGCTTGG GAACGGGGGC ATGAATACGG ATTACCCGGC TTACGGTCGC GAGCAATGCG CAATGATGGG CCAAGGGAAC CAGGGTGGAG CCTTTTGTGG CGGCACTGCC GGCGTGAACC TCGAGCAGCT TGCTATCATT CCCACCTATG CCCAGAAGTT CGCCGATGGT CGCGTGAGCG TTGGGTTCAG CCCGATTATC AGCTATCAGC GTTTTAGCGC CGAGGGCCTG GATGCGTTCG ATAACGAAAT GATGTCCGCA GATCCCGGTA ACGTTACCAG CGGTCGTACT GATTCGAGCT GGGGATACGG GGCCCAGATT GGCTTTCAGG CCGAGCTAGC GGAAGGGGCG CGCGTGGGTG CGAGTTATCG TTCGAAGATC CGTGCCGGTG ACTTCGATCG TTACTCGGGT TTGTTCGCCA ACGGAGGTGA GTTCGATATC CCATCGACCT ATGGCCTCGG CTTCTCGGTG GATGTTAGTC CCCGTGTGAC ACTCTCTGCC GATTATCAGA AGATTCGATA CTCGGAGATT GATGCGATTG CGAATCCTAG TACCAATCAG GCTCAGTTTG GGGCTGATGG TGGTCCCGGA TTTGGCTGGG ACGACGTGAA CATCTTCAAG TTCGGTGCCC AGATCGATGG GGGCAACGGC TGGACCTGGC GGGTCGGTTA TAACCGTGGC GAAAACCCGA TCAGTTCTGA AGATGTGATG TTGAACATCC TGGCTCCGGC CGTAATGACC GATCACTTCA CTGCCGGTTT CACCCGCGAG TTCGGCCAGC ACGAGATCAA CTTCGCGGCG ATGTATGCGC CGACTCAACG TGTGCGTGGT CAGGATATTA CGGGTATGGC GGGTCAGGAT ATCGAGATCG AAATGCGCCA GTACGAGCTC GAGATCGGGT ACGCGTACCG CTTCTGA
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Protein sequence | MEARIIRRSL VTVAVGLAMG SAGVANATNG YFAHGYGTKA KGMGGVGMAI SQDAYAPGIN PAGIAGMESR IDGSLTYFRP ERSFEAGMPS NPAAVVAGAP AVNPGSVDSD SENFFIPSLA FVQQIDENRS WGLALLGNGG MNTDYPAYGR EQCAMMGQGN QGGAFCGGTA GVNLEQLAII PTYAQKFADG RVSVGFSPII SYQRFSAEGL DAFDNEMMSA DPGNVTSGRT DSSWGYGAQI GFQAELAEGA RVGASYRSKI RAGDFDRYSG LFANGGEFDI PSTYGLGFSV DVSPRVTLSA DYQKIRYSEI DAIANPSTNQ AQFGADGGPG FGWDDVNIFK FGAQIDGGNG WTWRVGYNRG ENPISSEDVM LNILAPAVMT DHFTAGFTRE FGQHEINFAA MYAPTQRVRG QDITGMAGQD IEIEMRQYEL EIGYAYRF
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