Gene TK90_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0645 
Symbol 
ID8806394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp684866 
End bp686182 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content59% 
IMG OID 
Productmembrane protein involved in aromatic hydrocarbon degradation 
Protein accessionYP_003459896 
Protein GI289207830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.54968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.132324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAC GCATCATTCG CCGCAGTCTG GTGACGGTCG CGGTCGGCCT TGCAATGGGC 
AGCGCCGGCG TCGCCAATGC CACCAACGGC TATTTCGCGC ACGGCTATGG CACCAAGGCC
AAGGGCATGG GTGGGGTCGG CATGGCCATC TCCCAGGACG CCTACGCGCC CGGAATCAAC
CCCGCCGGTA TCGCCGGCAT GGAATCCCGC ATTGATGGCT CGCTCACCTA CTTCCGCCCG
GAACGATCAT TCGAGGCCGG CATGCCCAGC AACCCGGCCG CGGTTGTAGC GGGTGCCCCA
GCTGTGAATC CAGGTAGCGT GGATAGTGAC AGTGAGAACT TCTTTATCCC TTCTCTGGCA
TTCGTCCAGC AGATCGATGA AAACCGTTCC TGGGGGCTCG CATTGCTTGG GAACGGGGGC
ATGAATACGG ATTACCCGGC TTACGGTCGC GAGCAATGCG CAATGATGGG CCAAGGGAAC
CAGGGTGGAG CCTTTTGTGG CGGCACTGCC GGCGTGAACC TCGAGCAGCT TGCTATCATT
CCCACCTATG CCCAGAAGTT CGCCGATGGT CGCGTGAGCG TTGGGTTCAG CCCGATTATC
AGCTATCAGC GTTTTAGCGC CGAGGGCCTG GATGCGTTCG ATAACGAAAT GATGTCCGCA
GATCCCGGTA ACGTTACCAG CGGTCGTACT GATTCGAGCT GGGGATACGG GGCCCAGATT
GGCTTTCAGG CCGAGCTAGC GGAAGGGGCG CGCGTGGGTG CGAGTTATCG TTCGAAGATC
CGTGCCGGTG ACTTCGATCG TTACTCGGGT TTGTTCGCCA ACGGAGGTGA GTTCGATATC
CCATCGACCT ATGGCCTCGG CTTCTCGGTG GATGTTAGTC CCCGTGTGAC ACTCTCTGCC
GATTATCAGA AGATTCGATA CTCGGAGATT GATGCGATTG CGAATCCTAG TACCAATCAG
GCTCAGTTTG GGGCTGATGG TGGTCCCGGA TTTGGCTGGG ACGACGTGAA CATCTTCAAG
TTCGGTGCCC AGATCGATGG GGGCAACGGC TGGACCTGGC GGGTCGGTTA TAACCGTGGC
GAAAACCCGA TCAGTTCTGA AGATGTGATG TTGAACATCC TGGCTCCGGC CGTAATGACC
GATCACTTCA CTGCCGGTTT CACCCGCGAG TTCGGCCAGC ACGAGATCAA CTTCGCGGCG
ATGTATGCGC CGACTCAACG TGTGCGTGGT CAGGATATTA CGGGTATGGC GGGTCAGGAT
ATCGAGATCG AAATGCGCCA GTACGAGCTC GAGATCGGGT ACGCGTACCG CTTCTGA
 
Protein sequence
MEARIIRRSL VTVAVGLAMG SAGVANATNG YFAHGYGTKA KGMGGVGMAI SQDAYAPGIN 
PAGIAGMESR IDGSLTYFRP ERSFEAGMPS NPAAVVAGAP AVNPGSVDSD SENFFIPSLA
FVQQIDENRS WGLALLGNGG MNTDYPAYGR EQCAMMGQGN QGGAFCGGTA GVNLEQLAII
PTYAQKFADG RVSVGFSPII SYQRFSAEGL DAFDNEMMSA DPGNVTSGRT DSSWGYGAQI
GFQAELAEGA RVGASYRSKI RAGDFDRYSG LFANGGEFDI PSTYGLGFSV DVSPRVTLSA
DYQKIRYSEI DAIANPSTNQ AQFGADGGPG FGWDDVNIFK FGAQIDGGNG WTWRVGYNRG
ENPISSEDVM LNILAPAVMT DHFTAGFTRE FGQHEINFAA MYAPTQRVRG QDITGMAGQD
IEIEMRQYEL EIGYAYRF