Gene TK90_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0587 
Symbol 
ID8806332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp620837 
End bp621544 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_003459838 
Protein GI289207772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0123495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTAT TGCTGGAATA CCTGGTCGTC ACCTTCCTGG CGGTGTTCGT GATCGTGAAC 
CCGCTGACCA CCGCCTTCAT CTTCATGGCG ATGCTGCCGC GTGCCTCGGA GGAGAAGCGC
CGGGCGATCG CGCTGCGTTC GGTGAAGGTG GCCACCTCGC TGCTGTTCGC GTTCGCCCTG
CTGGGCGGGG TGATCTTCCA GCTGTTCGGG ATCACCCTGG CGGCGTTTCG TATCGCCGGC
GGGATCATCC TGTTCGGCAT TGCAATCGGC ATGATCCGGC AAAAGGGCGC GACCGAGAAG
GAGACCGCCG AGGAGGTCAA GGCCGACAAG GGGCAGGTGA CCGAGGACAT CTCGGTGATC
CCGCTGGCCA TCCCGTTCAT GAGCGGCCCG GGCGCGATCG CCACGGTGAT GATCCTGACC
AGCGAGGCGC CGACTGTTTA TCACACGGGG CTCGTATTCC TCGGCGTGCT GGCCTGCATG
GTGGCCTGCT ACTTCGCGAT GATCTATTCG CGCTACATCG TTCAGTACCT GGGCGATACC
GGGAAGGACA TCCTGACCAA GGTCTTCGGC CTGATCCTCG CCGTGCTGGC CGTACAGTTC
GTGATCAACG GCATCAGCGA CGCGGCGATC GGCTTCATGC TGGATACGCA GATGCTGGAC
GAGAACGAGG TGGAGGACCC GCGCGTGCCG GCGCGCGATC ACGATTAG
 
Protein sequence
MLVLLEYLVV TFLAVFVIVN PLTTAFIFMA MLPRASEEKR RAIALRSVKV ATSLLFAFAL 
LGGVIFQLFG ITLAAFRIAG GIILFGIAIG MIRQKGATEK ETAEEVKADK GQVTEDISVI
PLAIPFMSGP GAIATVMILT SEAPTVYHTG LVFLGVLACM VACYFAMIYS RYIVQYLGDT
GKDILTKVFG LILAVLAVQF VINGISDAAI GFMLDTQMLD ENEVEDPRVP ARDHD