Gene TK90_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0564 
Symbol 
ID8806305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp595050 
End bp595502 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID 
Productprotein TolR 
Protein accessionYP_003459815 
Protein GI289207749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.434395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC AGCGCCGTAA CAGCCGCCGC CTGCGGCGGC CCATGTCCCA GATCAACGTC 
GTGCCGTTTA TCGACGTGAT GCTGGTGCTT TTGATCATCT TCATGATCAC CGCGCCGATG
CTGCAGCAGG GCGTGGAAGT CGACCTGCCG GAGGCGGACG CCGAGGCCCT GGATCGGGAC
GAACAGGCGG CCGAGCCGCT GGTGGTGACC GTGGATGCCA GCGGGGCCAT GAGCCTGAAC
CAGGGGCCGA TCATTGACGA GCCGCTGGCG CCGCAGGAGA TGACCGAGAT CGTGCGCGAA
TTCCTGGCGG AGCACCCGGG AACCCAGACT TTTGTGCGTG GCGACCGTAA CGTGGACTAC
GGGCGTGTGA TCGACGCCAT GATCGCCCTG CAGCGAGCGG GCGGTGGGCG TGTCGGTCTG
ATTACCGAGC CGCCGCGCGA AAACAGCGAC TGA
 
Protein sequence
MSEQRRNSRR LRRPMSQINV VPFIDVMLVL LIIFMITAPM LQQGVEVDLP EADAEALDRD 
EQAAEPLVVT VDASGAMSLN QGPIIDEPLA PQEMTEIVRE FLAEHPGTQT FVRGDRNVDY
GRVIDAMIAL QRAGGGRVGL ITEPPRENSD