| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0510 |
|---|
| Symbol | |
|---|
| ID | 8806250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 533052 |
|---|
| End bp | 533909 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003459761 |
|---|
| Protein GI | 289207695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGT CCCAGCCCCG TGCCGTACTG ATTACCGGCT GCTCCAGCGG CATCGGGCTG
CACGCCGCGC GCGCGCTGCG CGCGCGCGGC TATCGCGTCT TCGCCACCGC CCGCCGCGGC
GAGGATGTCT CGCGCCTGAA GAACGAGGGC TTCGAGGCCC TGCAGCTGGA CCTGGACGAC
TCCGCCAGCA TTCATAGCGC GGTCAACGAG ATCCTGCATC GTACCGATGG CCACCTGTAC
GGCCTGTTCA ACAACGGGGC CTACGGCCAG CCCGGCGCGG TCGAGGACCT GAACCGGGCC
ACCCTGCGCG CACAGCTGGA GACCAACGTG CTGGGCTGGC TGGAACTGAC CAACGCCGTG
CTGCCGGCGA TGCGCCGCGC CGGCGAGGGC CGCATCATCC AGAACTCGTC GGTGCTCGGC
TTCGCCGCGC TGCGCCTGCG CGGAGCCTAC GTGACCTCCA AGTTCGCGAT CGAGGGCCTG
AGCGACACCC TGCGCCAGGA GCTGCACGGT ACCGGCATCC ATGTGGCGCT CGTCGAGCCC
GGCCCGATCC GCAGCGCCTT CCGCGCCAAC GCCCTGAAGG CCTTCCGCCG TCACATCCAC
CGCGAACACA GCCCCTGGGC CGAGACCTAC CGCGCCGCCG AGGCCCGCAT GGCCAACGCC
GAGGCCGACG CGCCATTCAC CCTCGGGCCG GAGGCGGTCA CCCGCTGCGT GGTGCATGCC
CTGGAGGCCC GCCGCCCGCG CGTGCGCTAC CGCATCACCT TCCCGACCAA ACTGTTCGCC
TTCCTCGGGT GGCTGCTCCC GGCTCGGGCG ATGGATGCCG TGCTGCGCGG TGTATCACGC
GGGGAGAACC GCGGATGA
|
|---|
| Protein sequence | MSESQPRAVL ITGCSSGIGL HAARALRARG YRVFATARRG EDVSRLKNEG FEALQLDLDD
SASIHSAVNE ILHRTDGHLY GLFNNGAYGQ PGAVEDLNRA TLRAQLETNV LGWLELTNAV
LPAMRRAGEG RIIQNSSVLG FAALRLRGAY VTSKFAIEGL SDTLRQELHG TGIHVALVEP
GPIRSAFRAN ALKAFRRHIH REHSPWAETY RAAEARMANA EADAPFTLGP EAVTRCVVHA
LEARRPRVRY RITFPTKLFA FLGWLLPARA MDAVLRGVSR GENRG
|
|---|
| |