| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0445 |
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| Symbol | |
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| ID | 8806185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 463046 |
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| End bp | 465250 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003459696 |
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| Protein GI | 289207630 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000342866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGAA AGACGAAATG CCGTCAGGTG GGACTTCTGA CCACCCCATA CACCCGCAAT
CGTAGGGACT GGCGCCGCCA CGCTGTCACG CTTGCGGTTC TGGGGGTTAT GGGAGTCCCG
GTGGCCCAGG CCCAGGATGC GGAGCCAACG CACTTGGCAC CCGTGCAGAT CATTGGTGAC
TCTGTGCATG CCCGGGATCT GGCTGGTTCG GGTGCCGTTG TGGAACCCGA ACAGTTGGAA
CTGGATGGCA CGACCGATAT CCATCAGGCT CTTAAGACCG TCCCGGGCAT GTATGTGCGT
GAAGAAGAGG GTTATGGGCT AAGGCCGAAC ATTGGGGTCC GGGCCGCGCC CCCGGGCCGC
AGCAGCAAGG TCACCATCAT GGAGGACGGG GTGTTGATGG CGCCAGCGCC ATACTCCAAC
CCGGCGGCGT ACTATTTTCC GACCACCAAA CGTATCCACT CCATTGAAAT TCTCAAGGGT
GCGCCGCTGC TACGGCATGG GCCGCAAACA ACCGGCGGGG TGGTCAATCT GCTGTCGACT
CCGATCCCGA CCGAGCGTCA AGGCAGTATC GAGACCGTCG TCGGTGAGCG TGGAGGGCTG
GACGTACACG GGACCTGGGG CGACCGCGTG GGGGATTGGA GCTACATGGT CGAAACGGTC
CAGCGCCGTA GTGATGGGTT CAAGGATATC GACCGCAGTA ACCGGGACAG TGGTTTCCGA
GTCGAGGATT ATGTCGCGAA GCTTCGGTGG GACGGGGACC GTCAGAGCGT CGAGCTCAAG
GCACAGCATT CCGAGGAGGT TTCCAACGAG ACCTACCTCG GCTTGACCGA TGGCGACTTC
TCCCGTGCGC CGAATCGCCG TTACGGGCTG TCCGAGATTG ATCAGATGGA TGTCGAGCAT
CAGGGTGCCA GCCTTACGCA TGAATTCGAC TGGTCGCCCC ACGTGCGCCA GACCTCGACG
GTCTACCGTA ACGATACCGC TCGCAATTGG TTCAAGTTGA GCGGCGATCT GGTGGCGGAT
GCCAACGAGG GCGATGAACG TGCCTATCGG ATCCTTCAGG GAACGGAAGA TACCTCGGGT
GGCGAGTTGA CCTATCGCAA CAACAATCGA GAGTACGTCT CCCAGGGAGT GCAAACCGAG
TTTGACCTGG CTTTGGGTGA TCACTGGATT CGTACGGGAG TGCGTTATCA CGAAGACGAA
ATGGATCGGT TCCAGCCAGA CGAACTCTAT GACCAGGTTA ATGGTTCGTT GGTACGCCAG
AGTCGCGTCG AACCGACTGG TAGCAATAAC CGTCTCGAGG ATGCCAAGGC CTGGAGCCTC
TGGATCACCG ATGAATGGCG AGTGACGAAC CGCCTGCGAC TGAATCTCGC GATGCGCTAC
GAGGATGTGA GGACGTCCCG TGTCCAATAT GCCGACCCGG GTCGGAACAC CGTGGAAGAC
CGGCGCTCGA ACGCCTACAG CGAATGGTTG CCCGGGGCTT CCATGACGTT CGATGTCAAC
GACAATTGGC AGCTACTGGC GGGGGTTCAT CGCGGTTTCT CGCCTCTGGG TGGTGGATCG
AGCGACGGTG AGCAACCCGA GACCAGCATC AACTGGGAGC TTGGAGGGCG TTATCGAACC
AATAACCTTT TTGTCGAGGC GATTGGTTTC CATAGCGACT TTACCGACCA GAGAGAGGAT
TGTTCGGTAG GCTCGCCCTG CTCGGATGGC TCCACTTCCG GCACGTTCAC CACCGGTGAA
GCGGAGATCT CCGGGCTTGA ACTCCAGGCC GGGACGCAAT TTGCCATGGG ACGTTTTCAA
GTGCCGGTGT CGGCCGCCTA TACCTATACC CGGGCGCGCA TCAGTCGCGA CAACCCGGCA
CAGGGTCTGG AGAAGGGCGA TCACCTGCAG GATATCCCGC GCCATCAACT CAACCTGCGC
GCGGGCCTGG AGCATCCCAG TGGCTGGGAT CACTATGCGG TGCTGAACTA CACCGATTCG
TCCTGTAGCT CGGTTGGTTG CAATCGCAGT GGATCGTCCT TTGACGAGAC GGATTCTTTG
ATGACGGTTG ATCTGACAAG CCGTTATGCA CTATCCAGCC AGACCGACAT CTTCCTGCGG
GCCAGCAACG TTTTCGATGA GCAACGCATC GTGGCACGTT CGCCCTACGG AGCCCGGCCG
AACCAACCCC GTACGATTTC CGTCGGTTTG AAACACCGGT TCTGA
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| Protein sequence | MARKTKCRQV GLLTTPYTRN RRDWRRHAVT LAVLGVMGVP VAQAQDAEPT HLAPVQIIGD
SVHARDLAGS GAVVEPEQLE LDGTTDIHQA LKTVPGMYVR EEEGYGLRPN IGVRAAPPGR
SSKVTIMEDG VLMAPAPYSN PAAYYFPTTK RIHSIEILKG APLLRHGPQT TGGVVNLLST
PIPTERQGSI ETVVGERGGL DVHGTWGDRV GDWSYMVETV QRRSDGFKDI DRSNRDSGFR
VEDYVAKLRW DGDRQSVELK AQHSEEVSNE TYLGLTDGDF SRAPNRRYGL SEIDQMDVEH
QGASLTHEFD WSPHVRQTST VYRNDTARNW FKLSGDLVAD ANEGDERAYR ILQGTEDTSG
GELTYRNNNR EYVSQGVQTE FDLALGDHWI RTGVRYHEDE MDRFQPDELY DQVNGSLVRQ
SRVEPTGSNN RLEDAKAWSL WITDEWRVTN RLRLNLAMRY EDVRTSRVQY ADPGRNTVED
RRSNAYSEWL PGASMTFDVN DNWQLLAGVH RGFSPLGGGS SDGEQPETSI NWELGGRYRT
NNLFVEAIGF HSDFTDQRED CSVGSPCSDG STSGTFTTGE AEISGLELQA GTQFAMGRFQ
VPVSAAYTYT RARISRDNPA QGLEKGDHLQ DIPRHQLNLR AGLEHPSGWD HYAVLNYTDS
SCSSVGCNRS GSSFDETDSL MTVDLTSRYA LSSQTDIFLR ASNVFDEQRI VARSPYGARP
NQPRTISVGL KHRF
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