| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0419 |
|---|
| Symbol | |
|---|
| ID | 8806159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 440527 |
|---|
| End bp | 441879 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF224 cysteine-rich region domain protein |
|---|
| Protein accession | YP_003459670 |
|---|
| Protein GI | 289207604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCGC CGACGCACCA ACGTGAAGGA AGTCTGGAAG CCCCGACCCG CCATCCGCTG
GACTGGAAGA ATCCCGAGTT CTACAACGAG GAATCGTTGT TCGCCGAGCT GGAGCGGGTC
TACGACATCT GTCACGGCTG CCGGCGTTGC GTCAGCCTCT GCAATTCGTT CCCCACGCTG
TTCGACCTGG TCGACGAATC CGAGACCATG GAGGTCGACG GGGTCGACAG GAAGGACTAC
TGGAAGGTGG TCGATCACTG CTACCTGTGT GATCTGTGCT ACCTGACCAA GTGCCCCTAC
GTGCCCCCGC ACGAATGGAA CGTCGACTTC CCGCACCTGA TGCTGCGGGC CAAAGCCGTG
CGTTTCCAGA AAGAGGGAGC GAAGGCCGCG CACAAGTTCA TGTCCAGCAC CGATACCGTC
GGCAAGCTGG CGGGCATCCC GGTGGTCGCC GGCGTAGTCA ACGCCGCGAA CAAGAACGGC
GCAATGCGGA AGGTGCTGGA CAAGACTATG GGCGTGCACC CGGATGCCCC GGTCCCCGAA
TACCACTCGA GCAAGGGTCG TTCGCGCATG GCGAAGGTTG CCAAGGGGGT TAGCAACCCC
GAGCCGGCCG GTGCCACCCA GGGCAAGGTC GCCCTCTACG CTACCTGCTA CGGCAACTAC
AACGAGCCGC ACCTGGTGGA GGACCTAGTC AAGGTCTTCG AGCATAACGG CATCGAGGTC
ACCCTGGTCG AGAAAGAGCA GTGCTGCGGC ATGCCCAAGC TCGAACTGGG CGACCTGAAG
GCGGTCGAGT CCGCGAAGGA TGCGAACATC CCGGCGATGA AGCGCATGAT CGATCAGGGC
TATGACATTG TCGCGCCGGT CCCCTCCTGC GTGCTGATGT ACAAGCAGGA ATTGCCGCTG
ATGTTCCCGG ACGAGCCCGA TGTCGCCGCC GTGCGCGATC GTATCTTCGA CCCGTTCGAA
TACCTGATGG AGCGCCACAA GGAAGGCAAG CTGAAGACCG ATTTCCCCGA GAAGCTCGGC
AAGATCGCCT ACCACGCGGC CTGTCACCTG CGGGTCCAGA ACATGGGCCT GAAGACCCGT
GACCTGCTGA AGCTCGTGCC GGATACCGAG ATCGACGTGA TCGAACGCTG CTCCGGGCAC
GATGGCACCT ATGGTGTTAA GAGCGAGTTC TACGAGACCG CGGCCAAGAT CTGCCGCCCG
GTGGTGAACC GGGTGCAGAA GGCCGAGTCC GATCACTACT CGAGTGACTG CCCGATGGCC
GGGCACATGA TCGAGAACGG GCTGCAGGGC AAGGGCGAGG ACAAGGCGCC CGAACACCCG
CTGACCCTGC TGCGCCAGGC CTACGGCCTG TAG
|
|---|
| Protein sequence | MSAPTHQREG SLEAPTRHPL DWKNPEFYNE ESLFAELERV YDICHGCRRC VSLCNSFPTL
FDLVDESETM EVDGVDRKDY WKVVDHCYLC DLCYLTKCPY VPPHEWNVDF PHLMLRAKAV
RFQKEGAKAA HKFMSSTDTV GKLAGIPVVA GVVNAANKNG AMRKVLDKTM GVHPDAPVPE
YHSSKGRSRM AKVAKGVSNP EPAGATQGKV ALYATCYGNY NEPHLVEDLV KVFEHNGIEV
TLVEKEQCCG MPKLELGDLK AVESAKDANI PAMKRMIDQG YDIVAPVPSC VLMYKQELPL
MFPDEPDVAA VRDRIFDPFE YLMERHKEGK LKTDFPEKLG KIAYHAACHL RVQNMGLKTR
DLLKLVPDTE IDVIERCSGH DGTYGVKSEF YETAAKICRP VVNRVQKAES DHYSSDCPMA
GHMIENGLQG KGEDKAPEHP LTLLRQAYGL
|
|---|
| |