| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0354 |
|---|
| Symbol | |
|---|
| ID | 8806089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 376529 |
|---|
| End bp | 377476 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003459605 |
|---|
| Protein GI | 289207539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.322397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGC TGCGCCATGT TCTTCCCCTG TTCGTCGGGG GGCTGTGGCT GACGCACGGA
GTGGCCCAGG CGGGGGTGGT CCCCCACCGG GAATCGCTGG AGCGCAGCGA CTGGCAGGTA
ATCGAGCTGG ACGATGCCTG CCGCATCGAG CAGGGCGTTC GTCACGGCGG TACGCTGCGC
TTCGAGACTC AGCCAGGCCT GGCCCTTCGC GCCTTCTGGC ATGCACCCTA CGCAATGCCC
GAGGGCGCCA CGGCGCGATT GCGCACCGGT GCCCCGGAGT GGCTGGGGGC GAGTCCGAAG
TCGCCCCTGG ATCTCGAAAT GCGCGCCGAA AGGCCGGATC GCTTCCGGGT TCCGGACGCA
CAGGTTCAGG CGCTCAAGGC CCGCCTTCTG GTGGGCCACG ACGTGCGGAT CGATTTCCCC
GGTGCCGAGG ACGCGGTGCA TTTTCGCGGC ATCCGTTTTG CCCAGCGCGC CGAGGCCTTC
GAGGCCTGCT ACACCGGGGC AGAAGGGCCG GATGTCGGGG CGCTGGATCG CTGGTCGGTG
TACTTCGCAA CCGGGAGCCG CGAACTGGAT TCCAGGGGGC GCGAGACCGT CGCCCGTGCG
GCCGAGACCC TGCGCACCGT AGAACGCCCG CGGGTGCGCC TGGTCGGGCT GACCGACGCC
GAGGGCCCGC GCGAGCTGAA CGAGCGTCTG AGCCGCCAGC GCGCAGAGGC CGTACGCGCG
GCGCTGGTGG AGGCGGGTGT GCCGGGTGAT GGATTGACGG TCGAGGCCGG TGGCGTCGAC
CCGGAGGCGG ACGGCGAGCG CGAGGGTTCG CGCCGGGTGG ATATCTGGTG GCTGGGCGGG
GCAGATGCCG CAGCCGGGCC ATCTTCCGTT GCGGAAACCG CTACCGAGAC CGAGCCGCAG
GCGGTGCCGG AGTCGGCCCC CGGCGTGCCA GGCTCCGCGG GCTGGTAG
|
|---|
| Protein sequence | MSVLRHVLPL FVGGLWLTHG VAQAGVVPHR ESLERSDWQV IELDDACRIE QGVRHGGTLR
FETQPGLALR AFWHAPYAMP EGATARLRTG APEWLGASPK SPLDLEMRAE RPDRFRVPDA
QVQALKARLL VGHDVRIDFP GAEDAVHFRG IRFAQRAEAF EACYTGAEGP DVGALDRWSV
YFATGSRELD SRGRETVARA AETLRTVERP RVRLVGLTDA EGPRELNERL SRQRAEAVRA
ALVEAGVPGD GLTVEAGGVD PEADGEREGS RRVDIWWLGG ADAAAGPSSV AETATETEPQ
AVPESAPGVP GSAGW
|
|---|
| |