| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0272 |
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| Symbol | |
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| ID | 8806003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 285608 |
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| End bp | 286666 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003459523 |
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| Protein GI | 289207457 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.109144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGA CCCTGAAGAA TGACCGTCTG CTGCGTGCGT TGCTGCGCGA GCCCGTGGAT
CGCCCGCCGA TCTGGATCAT GCGCCAGGCC GGGCGCTACC TGCCGGAGTA CCGCGAGACC
CGCGCCCAGG CCGGCAGCTT CATGAATCTG TGTCAGAACC CGGAGCTGGC CTGCGAAGTC
ACCATGCAGC CGCTGCGCCG GTTCCCGCTG GACGCGGCGA TCCTGTTCTC GGACATCCTG
ACTATCCCGG ATGCGATGGG CCTGGGACTC TATTTCGAGA CCGGCGAGGG CCCTCGTTTC
CGCGACCCGA TCCGTTCGCT CGAGGCGATC GAGAACCTGC CGGTGCCGGA TCCCGAGCAG
GAGCTGCGCT ATGTGATGGA TGCAGTGCGC CTCATCCGCC GTGAACTGAA TGGCGAAGTG
CCGCTGATCG GCTTTGCCGG CAGCCCGTGG ACGCTGGCCA CCTATATGGT CGAGGGTCAG
GGCTCGCGCG ACTTCGCCGA GACCAAGCGG CTGATGTACG GCGAACCGCA GGCGATGCAC
GCCTTGCTGC AGAAGGTCGC CACCGCGGTT ACCGAATACC TGAACGCGCA GATTCGCGCC
GGTGCGCAGG CCGTGATGGT CTTCGACACC TGGGGCGGTT CGCTTACGCC GCGCGGCTAT
CGCGAATTCT CGCTGGCCTA CATGCAGCGC ATCGTGGATG GCCTGATTCG GGACCACGAC
GGCCGCCGCG TGCCGGTTAC CCTGTTCACC AAGGGTGGCG ATGCCTGGCT CGAGGCGCAG
GCCGAGACCG GTGCCGATGC GCTGGGGCTG GACTGGACGA TCGAGATTGC CGAGGCCAGC
CGTCGTGTGG GCGATCGCGT GGCGCTGCAG GGCAACCTCG ATCCGTCGGT GCTGTACGCG
CCGGATGCGG TGGTGCGCGA GGAGGCCCTG CGGGTGCTGG ACGGCTTCGA CCGGGACACC
GGTCATGTCT TCAACCTGGG GCACGGGATT CATCCGGGGA TCGACCCGGA ACGGGTGGCA
ACCCTGGTTG AGACCGTCAC CTCCTACCGC CGCGACTAA
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| Protein sequence | MSQTLKNDRL LRALLREPVD RPPIWIMRQA GRYLPEYRET RAQAGSFMNL CQNPELACEV
TMQPLRRFPL DAAILFSDIL TIPDAMGLGL YFETGEGPRF RDPIRSLEAI ENLPVPDPEQ
ELRYVMDAVR LIRRELNGEV PLIGFAGSPW TLATYMVEGQ GSRDFAETKR LMYGEPQAMH
ALLQKVATAV TEYLNAQIRA GAQAVMVFDT WGGSLTPRGY REFSLAYMQR IVDGLIRDHD
GRRVPVTLFT KGGDAWLEAQ AETGADALGL DWTIEIAEAS RRVGDRVALQ GNLDPSVLYA
PDAVVREEAL RVLDGFDRDT GHVFNLGHGI HPGIDPERVA TLVETVTSYR RD
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