Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0204 |
Symbol | |
ID | 8805934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 212806 |
End bp | 214623 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | GTP-binding protein TypA |
Protein accession | YP_003459456 |
Protein GI | 289207390 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.672165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.152752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA AGCTTCGCAA CATCGCCATC ATCGCCCACG TTGATCATGG CAAGACCACG CTGGTCGACC AGCTCCTGCG CCAGTCCGGC ACGCTCGATG CGCGCGGCGA CCACGGCGAG CGGATCATGG ATTCGAACGC GATCGAGAAA GAACGCGGGA TCACCATCCT GGCCAAGAAC ACGGCCATCG AATGGCAGGA CTACCGCATC AACATTGTCG ACACACCCGG ACACGCCGAC TTCGGTGGCG AGGTCGAGCG CGTCCTGTCC ATGGTCGACT CCGTGCTGCT GCTGGTGGAC GCGGTTGACG GCCCGATGCC GCAGACCCGC TTCGTGACCC AGAAGGCCTT CGCGATGGGC TTCAAGCCGA TCGTGGTGGT CAACAAGGTC GACCGCCCCG GCGCGCGCCC GGACTGGGCC GTGGACCAGG TGTTCGACCT GTTCGATCGC CTCGGCGCGA CCGACGAACA GTTGGACTTC CCCATCGTGT TCGCCTCCGC CCTGAACGGC TTCGCCGGCA TGGATTCCAG TGTCACCGAA GGCGACATGA CCTGTCTGCT GGAGACGATC GTCGAGCATG TGTCCCCGCC GAACGTCGAC GCCGACGGCC CGTTCCAGAT GCAGGTCTCC TCGCTGGACT ACAACTCCTA CCAGGGCCTG ATCGGCATCG GCCGCGTGAA GCGCGGGCGC ATCAAGCCGA ACACCCCGGT CAAGGTGGTA GACCGCGAGG GCAAGGTGCG TAATGGCCGC ATGCTGCAGA TCATGGGCTT CCATGGCCTG GAGCGTGTCG AGGTCGCGGA GGCCCGCGCC GGCGACATCA TTACCTTCAC CGGCATGGAC GAGCTGTACA TCTCCGACAC CCTGTGCGAC CCGAATAACG TCGAGGCGAT GGAACCGCTG ACCGTGGATG AGCCGACGGT GACCATGACC TTCCAGGTCA ACACCTCGCC GTTCGCCGGG CGCGAAGGCA AGTACGTGAC CTCGCGTGTG CTGCGCGACC GCCTGCTGGA AGAGCTCAAG CACAACGTCG CCCTGCGCGT GGAAGAGACC GACGACGCTG ACAAGTTCAA GGTCTCCGGG CGTGGCGAAC TGCACCTGGG CATCCTGATC GAGAACATGC GCCGCGAAGG CTACGAGCTG GGCGTCTCGC GCCCGGAAGT GGTCATCAAG GAAGTGGACG GCGTGAAGCA GGAGCCCTAC GAGGCCGTCA CCGTTGACGT CGAGGAGCAG CACCAGGGCA CGATCATGGA AAAGCTCGGC GAACGCCGCG GCGACATGAC CAACATGGTG CCCGACGGCA AGGGCCGCGT GCGCCTGGAC TTCATCATCC CGTCGCGCGG GCTGATCGGC TTCCAGACCG AGTTCATGAC CGCGACCTCC GGCACTGGCA TCCTGCACCA CATCTTTGAC CACTACGGCC CCTATCAGCC GGGTGCGGTC GCCTCGCGCC AGAACGGCGT GCTGATCGCC AACGCCGCCG GCAAGGCGCT CGGCTTTGCC CTGTTCAACC TGCAGGATCG CGGCAAGCTG TTCATCGGCC CCGGCGACGA GGTCTACGAG GGTATGGTCA TCGGCCTGCA CTCGCGCGAG AACGACCTGG TCGTCAACGC GCTCAAGGCC AAGCAGCTGA CCAACATCCG CGCCGCCGGT ACCGACGAGA ACATCCAGCT GACCCCGCCG ATCCGCATGA CGCTGGAACA GGCCATCGAG TTCATCGACG ACGACGAACT GGTCGAGGTC ACCCCGGAAA ACCTGCGTAT CCGCAAGAAG TTCCTGCTGG AGCACGAACG CAAGAAGGCC TCCCGCGCCT CGGCGTAA
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Protein sequence | MTEKLRNIAI IAHVDHGKTT LVDQLLRQSG TLDARGDHGE RIMDSNAIEK ERGITILAKN TAIEWQDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTQKAFAMG FKPIVVVNKV DRPGARPDWA VDQVFDLFDR LGATDEQLDF PIVFASALNG FAGMDSSVTE GDMTCLLETI VEHVSPPNVD ADGPFQMQVS SLDYNSYQGL IGIGRVKRGR IKPNTPVKVV DREGKVRNGR MLQIMGFHGL ERVEVAEARA GDIITFTGMD ELYISDTLCD PNNVEAMEPL TVDEPTVTMT FQVNTSPFAG REGKYVTSRV LRDRLLEELK HNVALRVEET DDADKFKVSG RGELHLGILI ENMRREGYEL GVSRPEVVIK EVDGVKQEPY EAVTVDVEEQ HQGTIMEKLG ERRGDMTNMV PDGKGRVRLD FIIPSRGLIG FQTEFMTATS GTGILHHIFD HYGPYQPGAV ASRQNGVLIA NAAGKALGFA LFNLQDRGKL FIGPGDEVYE GMVIGLHSRE NDLVVNALKA KQLTNIRAAG TDENIQLTPP IRMTLEQAIE FIDDDELVEV TPENLRIRKK FLLEHERKKA SRASA
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