| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0140 |
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| Symbol | |
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| ID | 8805869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 142782 |
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| End bp | 144671 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003459392 |
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| Protein GI | 289207326 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.579099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.193074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA TCCCCGAGTC GTTTGCCCGC AAGACCGCCG AGGTCTCCGC GGAGGTCACC
CGCCCGTTCC CGAACTCCGA GAAGCGTTAC GTCGAGGGTT CGCGCGCGGA CATCCGCGTG
CCGTATCGCG AGGTCGCGCA GACGCCGACG ATGACCTCCG GCACCCCCGA AGAGAACCCG
CCGATCCCGG TCTACGACAC CTCCGGCCCC TACACCGACC CCGACGCAAG CATCGACCTG
CACCGGGGGC TGGCGGACCT GCGCGGCCCC TGGATCGACG AACGCGCGGA CACCGAGTGG
CTGGACGGCC CGAGCTCCGA GTACGGCCGC GCCCGCGCCG CCGATCCGGA ACTGGCCAGC
CTGCGCTTCG GGCACATCCG CCCGCCGCGC CGCGCGCAGG CCGGCGCGAA CGTCTCGCAG
ATGCACTACG CCCGGAAGGG CATCATCACC CCGGAGATGG AGTACGTCGC GATCCGCGAG
AACAACCGCC TGCAGGAGCT GCGCGCCGAC CCGCGCTACC AGAAGCTGCT GCGCCAGCAC
GCCGGCGAGT CGTTCGGCGC CTCCATCCCG GATGAAATCA CCCCCGAGTT CGTGCGTGAC
GAGATTGCCC GCGGTCGCGC GATCATCCCC GCCAACATCA ACCACCCCGA GCTCGAGCCG
ATGATCATCG GCCGCAACTT CCGGGTGAAG GTGAACACCA ACATCGGCAA CTCCGCGGTC
ACCTCCTCGA TCGAGGAGGA GGTAGAAAAG CTTGTCTGGT CCGCGCGCTG GGGCGGCGAC
ACCCTGATGG ACCTGTCCAC CGGCAAGAAC ATCCACGAGA CCCGCGAGTG GATCCTGCGC
AACTCGCCGG TACCGATCGG CACCGTGCCG ATCTACCAGG CGCTGGAGAA GGTCGACGGC
AAGCCCGAGG ACCTGACCTG GGAGCTGTTC CGCGACACCC TGATCGAGCA GGCCGAGCAG
GGCGTGGATT ACTTCACCAT CCACGCCGGC GTGCGGTTGC AGTACGTGCC GCTGACTGCT
GACCGCGTGA CCGGCATCGT CTCCCGCGGC GGTTCGATCA TGGCCAAGTG GTGCCTGGCG
CATCACCAGG AGAACTTCCT CTACACCCAC TTTGACGAGA TCTGCGAGAT CATGAAGGCC
TTCGACGTCT CGTTCTCGCT GGGGGACGGC CTGCGCCCCG GCTGCCTGGC CGATGCCAAC
GACGCCGCCC AGTTCGGCGA GCTGGAGACC CTGGGCGAGC TGACGCAGAA GGCCTGGGCG
CACGACGTGC AGGTGATGAT CGAGGGCCCC GGCCACGTCC CGCTGCAGAA GGTGAAGGAG
AACGTCGACA AGGAGCTGGA GGACTGCTTC GAGGCGCCGT TCTACACCCT TGGCCCGCTG
GTGACCGACA TCGCCCCGGC CTACGACCAC ATCACCTCCG GTATCGGCGC GGCCAACATC
GGCTGGTACG GCACCGCGAT GCTCTGCTAC GTGACGCCGA AAGAACATCT GGGCCTGCCC
AACAAGCAGG ACGTGCGCGA CGGCATCATC ACCTACAAGA TCGCCGCCCA CGCCGCCGAC
CTGGCCAAGG GCTTCCCCGG CGCGCAGCTG CAGGACAACG CCCTGTCCAA GGCACGCTTC
GAGTTCCGCT GGGAGGACCA GTTCAACCTG GCACTGGACC CGGAGCGCGC GCGCGAATTC
CACGACGAGA CCCTGCCGAA GGAGGCGCAC AAGGTCGCCC ACTTCTGCTC CATGTGCGGC
CCGAACTTCT GCTCCATGAA GATCACCCAG GACGTGCGCG ACTATGCCGC GGCCCAGGGC
ATCAGCGCTG ACGAGGCCCT GCAGAAGGGC ATGCAGGAGA AGGCGGTGGA ATTCGTCGAG
AAGGGCGCGG AGATCTACCG CAAGACCTGA
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| Protein sequence | MSAIPESFAR KTAEVSAEVT RPFPNSEKRY VEGSRADIRV PYREVAQTPT MTSGTPEENP
PIPVYDTSGP YTDPDASIDL HRGLADLRGP WIDERADTEW LDGPSSEYGR ARAADPELAS
LRFGHIRPPR RAQAGANVSQ MHYARKGIIT PEMEYVAIRE NNRLQELRAD PRYQKLLRQH
AGESFGASIP DEITPEFVRD EIARGRAIIP ANINHPELEP MIIGRNFRVK VNTNIGNSAV
TSSIEEEVEK LVWSARWGGD TLMDLSTGKN IHETREWILR NSPVPIGTVP IYQALEKVDG
KPEDLTWELF RDTLIEQAEQ GVDYFTIHAG VRLQYVPLTA DRVTGIVSRG GSIMAKWCLA
HHQENFLYTH FDEICEIMKA FDVSFSLGDG LRPGCLADAN DAAQFGELET LGELTQKAWA
HDVQVMIEGP GHVPLQKVKE NVDKELEDCF EAPFYTLGPL VTDIAPAYDH ITSGIGAANI
GWYGTAMLCY VTPKEHLGLP NKQDVRDGII TYKIAAHAAD LAKGFPGAQL QDNALSKARF
EFRWEDQFNL ALDPERAREF HDETLPKEAH KVAHFCSMCG PNFCSMKITQ DVRDYAAAQG
ISADEALQKG MQEKAVEFVE KGAEIYRKT
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