| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0121 |
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| Symbol | |
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| ID | 8805850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 127698 |
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| End bp | 129002 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003459373 |
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| Protein GI | 289207307 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACT TCGACTACCA CGGCAACACG CTGCATGCCG AAGGCGTGGC GCTGGACCAC
CTCGCCCAGC TGGTGGGTAC GCCCGCCTAC GTGTATTCGC GCGCCACCCT TGAGCGCCAC
TACCGCGCGT TCAGCGAGGC CCTGATCGGC ACGCCGCACC AGGTCTGCTT CGCGGTGAAG
GCGAACTCCG CGCTGGGGGT GCTGAACGTG CTCGCGCGCC TGGGCGCCGG CTTCGACATC
GTCTCCGGCG GCGAACTGGA ACGTGTACTG CGCGCCGGCG GCGACCCGGC GAAGGTCGTG
TTCTCGGGCG TCGGCAAGAC CGCGGCCGAG ATGCGCCGGG CACTGAAGGT CGGCATCCAT
TGCTTCAACG TCGAATCCGC CCCGGAGCTG GAGCGGCTGG AGTCCATTGC GGCCGAGATG
GGCGTGACCG CGCCGGTCTC GATCCGCGTG AACCCGGACG TCGACGCCGA GACCCATCCC
TATATCGCCA CCGGCCTGCG TGAGAACAAG TTCGGCGTTG CCATCGAGGA GGCGCCGGCG
CTGTATGCCC GGGTACGCGA CAGCCAGCAC CTGGAGGCCA CCGGCGTCGA TTTCCACATC
GGCTCGCAGC TGACCCGGAT CGACCCGTTC ACCGATGCCC TGAAACGCGT GCTGACGCTG
GTCGACCAGC TGGCCGCAGA CGGCATCGAA CTCGAACATA TCGATGTCGG CGGCGGGCTG
GGCGTGCGCT ACCGCGACGA GACCCCGCCG GAGCCGGACG CCTGGGCCAG TGCCCTGCGC
AAGGTGATGG GCGAGCGCTC GCTGAAGGTG CTGCTGGAAC CCGGCCGGGC AATCGCGGCC
AACGCCGGGG TGTTCCTGAC CCGCGTGGAG TACCTCAAGC ACACCGAGGC CCACGACTTC
GCGATCGTCG ACGGGGCGAT GAACGACCTG CTGCGCCCGG CCCTTTATGG CGCCTGGCAG
GAGATCATCC CGGTCGTGCA GCGCCGTGAA ACCGCCGCGC GCACCTACGA CATCGTCGGC
CCGGTCTGCG AGACCGGCGA TTTCCTCGGC CGCGAACGCG AACTGGCACT GGCCGCGGGC
GACGTGCTCG CCGTGCGCTC GGCCGGGGCC TACGGCTATG TCATGGCCGG CAACTACAAT
TCGCGCCCGC GCCCGCCGGA GATCATGGTC GACGGCGACC ACTTCCAGAT CATCAACCGC
CGCGAGCAGG TCGACCACCT GATGATGCGC GAGAGCATGC TGCCCCGGGA CCCCGAAGAC
GCGGACCCGG ACGACGAAAA CCCGCCCGGG AGCGTGGACC CGTGA
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| Protein sequence | MDYFDYHGNT LHAEGVALDH LAQLVGTPAY VYSRATLERH YRAFSEALIG TPHQVCFAVK
ANSALGVLNV LARLGAGFDI VSGGELERVL RAGGDPAKVV FSGVGKTAAE MRRALKVGIH
CFNVESAPEL ERLESIAAEM GVTAPVSIRV NPDVDAETHP YIATGLRENK FGVAIEEAPA
LYARVRDSQH LEATGVDFHI GSQLTRIDPF TDALKRVLTL VDQLAADGIE LEHIDVGGGL
GVRYRDETPP EPDAWASALR KVMGERSLKV LLEPGRAIAA NAGVFLTRVE YLKHTEAHDF
AIVDGAMNDL LRPALYGAWQ EIIPVVQRRE TAARTYDIVG PVCETGDFLG RERELALAAG
DVLAVRSAGA YGYVMAGNYN SRPRPPEIMV DGDHFQIINR REQVDHLMMR ESMLPRDPED
ADPDDENPPG SVDP
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