Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0077 |
Symbol | |
ID | 8805806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 85851 |
End bp | 86546 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | D-Ala-D-Ala dipeptidase |
Protein accession | YP_003459330 |
Protein GI | 289207264 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.033757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTAA TGAGTCTGTG GCTGGCCGGT CTGGTCCTGG TCTGGCCGAT CGTCGCCAGC GCGGATGAGG CGTGGCCGCC GGGATTCGTG GCGGCCCGCG ACGTGGTGCC GGGGTTGGTC GAGGAGATCC GCTATTTCGG CGAAGACAAC TTCGTCGGCG AGCCCATTGA CGGCTATGAG GCGCCGGTTT GCATCCTTAC CGTCCCGGCT GCCGAGGCGC TGGCCGGGGT GCAGGAACGC CTGAAGCCGT TTGGGCTCGG GATCAAGGTG TTTGACTGTT ACCGCCCCCA GCAGGCGGTG GACCATTTCG TGCGCTGGGC GGCGGACCCG GACGCAACGG AGATGCAGGA GCGCTATTAC CCGAACGTGC CCAAGGACGA GTTGTTCGAG CGCGGCTATA TCGCGGAGCA GTCCACCCAT TCGCGCGGCT CCACGGTCGA TGTCACCCTC GTTGATCGCG AAACCGGCAG CGAGCTGGAC ATGGGGACCG ACTTCGACCG CTTCAGTCCG CGCTCCTGGC CGGACGCGGC CGATGCCACA CCACAGCAGC GCGCGAACCG CGTCCTGCTA CAGCGCCTGA TGGTGGAGGC GGGCTTCGAG CCCTACGCCC AGGAGTGGTG GCACTTCACG CTGGCCAACG AACCCTTCCC TGAGACTTCG TTCGACTTCC CCGTGGCTCA CCCGCCCCGC GACTGA
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Protein sequence | MRLMSLWLAG LVLVWPIVAS ADEAWPPGFV AARDVVPGLV EEIRYFGEDN FVGEPIDGYE APVCILTVPA AEALAGVQER LKPFGLGIKV FDCYRPQQAV DHFVRWAADP DATEMQERYY PNVPKDELFE RGYIAEQSTH SRGSTVDVTL VDRETGSELD MGTDFDRFSP RSWPDAADAT PQQRANRVLL QRLMVEAGFE PYAQEWWHFT LANEPFPETS FDFPVAHPPR D
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