| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0056 |
|---|
| Symbol | |
|---|
| ID | 8805785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 63687 |
|---|
| End bp | 64853 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003459309 |
|---|
| Protein GI | 289207243 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG GCCCCCGCGA GATCACCACG CCGTTTCGGC CCATCCCCCT GGATATCCCG
GAGGGCATGA AACCGAACGA GTTCTTCAAC AGCACCGAGA ACCTCGCCGA CCTGGTGAAC
AACAACGGGC TGCTGGTCAA TCCGGAAAAC CTCCTGCTCT ACCGCAAGGC GCTGGGGCAC
AGCAACGAGT TCGACTGCTC TATCATCTAC AACACCTCGC AGACCATCCT CGACCCGATG
GGGCGCCCGG TGCGGCGCAC CCAGGTGCCG GAGCCGGTGC GGCATGTCTG GAACCGGATG
AACGGAGTGA TCATCGAGTA CATGCTGGAG CAGTACCCGG ACCCGGCCGA GGCCCTGGTG
CTGGCGGGCG AGGCCAGCCT GGACGCGACC TGGCCGCTGA CCGCGCCCGG GGTGCCCAGT
ATCCGCATGC TGCACAACCA TTTCATCGTC TTTCCGATGG CGACGCTGGC TGAAGCGCCG
CTGGCCGATC CCGGTAACCC CAACCTGACC GATGGCGGCC AGCACAGCCT GTTCCAGGCC
TATATGCGCG ATGTCTACCG GGCCTTCTTT ACCCGCGCCC TGGACCTGCA GATCCTGCGG
CCGGCGCCCG ATCACCAGGC CCGACTCGCG CTGACCGGCT ACCCGCACGG CCTCCCGAGC
TGGGAGATCC AGGGTGGGGT CGAGGCGTTG AAGGACATCC GCTTCTGGCG CGAATACGAC
GCGGTCCTGC AGGGCTTTCT GGACTTCTAC CGCACCTTCT TCTCGCAGGT CTCCACCCGC
AATGCCCCGA TGCCCGAGGG CGTGCACTTC CCCGATGCGG TGGAGGAGGT CCTGCTGTTC
AACAACGATT TCCTCAAGAC CGCCAAGAAG GTGCGCGATC GCTGCTTCAC CGACGCCAAG
TACGCCCATG CGATCCGTTG GCAGCCGGCC TTCAAGCAGC TGATTTACCG CAACGACGAG
GGCCGCTTGA TCGTCACGAT CAGTCAGAAT TCGATCGGCA ACGCGATCAC TGAGCTGCTG
GGGGTGGTGG TCAACCGGGT GCCGGACGCG GAGGCCTACG AGCACGTCGA ACCGGCCCTG
GTCGAGAAGT TGCTGGAGGT GCGCCGCCGC CTGGTAGAGC TCGATCTGGG TGAGGGGATC
ACGACCGAGG CCTGGTCGGC GGTCTGA
|
|---|
| Protein sequence | MQAGPREITT PFRPIPLDIP EGMKPNEFFN STENLADLVN NNGLLVNPEN LLLYRKALGH
SNEFDCSIIY NTSQTILDPM GRPVRRTQVP EPVRHVWNRM NGVIIEYMLE QYPDPAEALV
LAGEASLDAT WPLTAPGVPS IRMLHNHFIV FPMATLAEAP LADPGNPNLT DGGQHSLFQA
YMRDVYRAFF TRALDLQILR PAPDHQARLA LTGYPHGLPS WEIQGGVEAL KDIRFWREYD
AVLQGFLDFY RTFFSQVSTR NAPMPEGVHF PDAVEEVLLF NNDFLKTAKK VRDRCFTDAK
YAHAIRWQPA FKQLIYRNDE GRLIVTISQN SIGNAITELL GVVVNRVPDA EAYEHVEPAL
VEKLLEVRRR LVELDLGEGI TTEAWSAV
|
|---|
| |