Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3893 |
Symbol | |
ID | 8755578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 4078195 |
End bp | 4080909 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003410833 |
Protein GI | 284992279 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGCCG GACGGGACCG CGAACGCGCG GCGATCGCCG CACTGCTCGA CGCCGCCCGC ACCGGGACCG GCGGGGCGCT GGTGATCCGC GGCGTGGCCG GGTCCGGCAA GTCGACGCTG CTGGCCGACG CCGTCTCCGC CGCCTCCGGG ATGCGCGTAC TGCGCACGTC GGGCGTGGAG TCGGAGTCCC CGCTGGCATT CGCCGCCCTG CAGCGGCTGC TGTGGCCGCT GCGTGCCCGC CTCGATGCGC TGCCGGCGCC GCAGGCCGCG GCGCTGGGCG CGGCGCTGGG CGAAGCGGCC GGCGACGGCG ACCGGTTCCT GGCCTTCCTG GGCACGCTGA GCCTGCTCGC CGACGCCGCC GAGGAGGCAC CGGTGCTCGC CGTCATCGAC GACGCACACT GGCTCGACGA CGCCTCGGCC GCCGCGCTGC TGTTCGTCGC CCGCCGGCTG CAGGCTGAGC GGGTCGCGCT GCTGTTCGCT GCCCGCGATG GCGAGGCCCA CGACTTCGAC GTCCCCGACC TGCCCACCGC CGTCCTCGGG GGCGTGACCG GGCCCGACGC CGACACGATT CTGTCCGCGC GGGCCGACGA CGCGGTGGAC CCGGCGGTGC GCGACCGGCT GGTGGCCGCC ACCGGCGGCA ACCCGCTCGC GCTCGGCGAG CTCGCCGATG CCCTCACCGG CGACCAGCTG GCCGGCCGGG CGTCGCTGCC GACGCCGCTG CCGCTGACCG GCGGCGTCGA ACGCGGGTTC CTGGACCGGT ACCGCCGCCT GTCGACGAAC GCGCAGCGGT TCCTGCTGCT CGCCGCGGCC GACGACACCG GCCGACTGAC CGTCGTCCGC GACGCCGCCG CACGTCTCGA CGTCGACGAC GACGCCCTGG ACGAGGCCGA GCGGGTCGGG CTGCTCCGCG TCGACGGCGA CAGCCTGGCG CTGTACCACC CGCTGGTGCG CTCGGCGGTG TACCGCGCGG CCACCAGCAC GCAGCGCCGT GCCGTGCACC GGGCGCTGGC CGACGTCCTC GCCGCCGACC CCGATCGGCA CGCCTGGCAC CTGGCTGCCG CCGCCGACCG CCCCGACGAG TCCGTGGTCG CAGCGCTGGA CGGGGTGGCC GACCGCGCCG CCGCCCGCGG CGGGCACGAG GCCGCCTCCG CCGCCTGGGC CCGCGCCGCC GAGCTCACCG TCGACAGCAA GGCCCGCGGC CGCCGGCTGT TCTCCGCCGC GTCCTCGGCG TGGCTCGGCG CCCATCCGTC GCGGGCCGCC GGGCTCGCGG CCGCCGCCGG GGCCGAAGTG ACCGACCCGG TCCAGCGCGC GCGGCTGCTG CTGCTGCAGG GCCAGATCGA GTGGAACACC CACTCCCTCA ACGAGGGCTA CGACCTCGTC CTGCAGGCCG CCCAGCTGGC CGCCGAGGTC GATGAGGCGA CGGCGCGGCC GCTGGCGATG CTGGCCGCGG CGCTGTCGGC GTTCGGGGCG CGCTCGCCCC GTCCGGTCGA TCCGGCGGCG CTGGTGACCG AGCCGGCCGC CGACGCACCG CCCACCGCCC GTGCCGCATG GGCGCTGCTA CAGGGGTTCG CCGCCGTCGG CCGCCGCGAC TGGGCGACCG CCGCGGCATC CTTCCGGCGC GCGTTCGACC TCACCGACCC CGACCCGCTC GAGGGCGACC ACGTCCTGCA GCCCAACCTC GGCATCGCCG CCTGGCTCAT CGACGAGGAC GAGCGCAGCC TGCGGCTGCA CGAGGAGCAG CTGACCGCCG CCCGCCGCGC CGGGGCACTG AACATGGTCG AGCACGCCCT CACCCGGGGA TTCCACTCCC AGCTGGCGAC CGGCGCGTGG ACGACGGCCG CCGGCGCCGC CGCCGAGGCG CTGCCACTGA CCGCCAGCAC CGGCTCCACC GGGCTGACCG CGCTGCCCAC CGCCCAGCTG GCCGTGGTCG CGGCCCTGCG CGGCGACGAG GCCACCGACC GGCACCTCGC CGACGTCGCC GCGATCCGCG CGGCGCATCC GGTCGGCATC ACCGACAGCC TCGTGGCCGA CCTCGCGCAC TGGGCGCGGG CGCTGCGGAC CGCCGGGCAG CCCGCGCCCG CGCTGCACCA CCTGGAGCAG CTGCAGAACC CGGTGCGGCG CCGCATGGCC GCCCTCGACG TGTTCGACAT CGCCGTCCGG GCCGGCCGGG AGGACGTCGC CCGTACCTGG CTGACCGAGG TCGAGCAGTT CGCCGCGGCC ACCGGCACCG CCGGCGCGGT CGCCGTCACC GAGCACGGCC GCGCCGTGCT CGCCGACCGC CCCGACGCCG AGAAGCACTT CCTCGCCGCG CTGGACGCGC ACGCCGCCTC CCCGCGGCTG CCCGACCGGG CCCGCACCCA CCTGGCCTAC GGCGAGCACC TGCGGCGCGC CCGGCGGCGG GTCGACGCCC GCGAGCACCT GCGGGCTGCG CTCACCCTCT TCGAGGAGCT GGGCGCGGCG CCCCACGCCG AACGCGCTGC CCAGGAGCTG CGTGCCTCCG GGGAGACCGC CCGCCGCCGC GACGTCACCA CGACGACGGA GCTCACCGCG CAGGAACGCC AGGTCGCCGG GCTGGTCCGG CAGGGCCTGT CCAACCGGGA CGTCGCCGCC CGGCTGTTCG TCAGTCCCCG CACCGTCGAC TTCCACCTGC GCAACGTGTT CAGCAAGCTC GGCGTGGCCT CCCGCGCCGA GCTCACCGCG CTGGCCCTGG ACTAG
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Protein sequence | MLAGRDRERA AIAALLDAAR TGTGGALVIR GVAGSGKSTL LADAVSAASG MRVLRTSGVE SESPLAFAAL QRLLWPLRAR LDALPAPQAA ALGAALGEAA GDGDRFLAFL GTLSLLADAA EEAPVLAVID DAHWLDDASA AALLFVARRL QAERVALLFA ARDGEAHDFD VPDLPTAVLG GVTGPDADTI LSARADDAVD PAVRDRLVAA TGGNPLALGE LADALTGDQL AGRASLPTPL PLTGGVERGF LDRYRRLSTN AQRFLLLAAA DDTGRLTVVR DAAARLDVDD DALDEAERVG LLRVDGDSLA LYHPLVRSAV YRAATSTQRR AVHRALADVL AADPDRHAWH LAAAADRPDE SVVAALDGVA DRAAARGGHE AASAAWARAA ELTVDSKARG RRLFSAASSA WLGAHPSRAA GLAAAAGAEV TDPVQRARLL LLQGQIEWNT HSLNEGYDLV LQAAQLAAEV DEATARPLAM LAAALSAFGA RSPRPVDPAA LVTEPAADAP PTARAAWALL QGFAAVGRRD WATAAASFRR AFDLTDPDPL EGDHVLQPNL GIAAWLIDED ERSLRLHEEQ LTAARRAGAL NMVEHALTRG FHSQLATGAW TTAAGAAAEA LPLTASTGST GLTALPTAQL AVVAALRGDE ATDRHLADVA AIRAAHPVGI TDSLVADLAH WARALRTAGQ PAPALHHLEQ LQNPVRRRMA ALDVFDIAVR AGREDVARTW LTEVEQFAAA TGTAGAVAVT EHGRAVLADR PDAEKHFLAA LDAHAASPRL PDRARTHLAY GEHLRRARRR VDAREHLRAA LTLFEELGAA PHAERAAQEL RASGETARRR DVTTTTELTA QERQVAGLVR QGLSNRDVAA RLFVSPRTVD FHLRNVFSKL GVASRAELTA LALD
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