Gene Gobs_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_3793 
Symbol 
ID8755478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp3975580 
End bp3976581 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID 
ProductTRAP transporter solute receptor, TAXI family 
Protein accessionYP_003410740 
Protein GI284992186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.848653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA GCCCGATCCC CGCCCGGCCG ACCCGCCGCC TCCTCGGCAC CGCGCTGGCC 
TCCGCGCTCC TGCTCACCGC CTGTGGCGGG GGCGAGTCCG GGGGCACCGG GGGCGGTGAG
GGCGCGCAGG CCGGCGGCCC CCTGACCTTC GCCACGGGTG GCACCGGCGG CGTCTACTAC
CCCTACGGCG GTGGCATCGC CAACCTGCTC AGCTCGGAGC TGGAGGGGAC GACGGTCACG
GTCCAGGAGA CCAACGCCTC GGTCGACAAC ATGCAGCTGC TGGCCTCGGG GCAGGCGCAG
CTGGCCTTCG GCCTCGGCGA CGTCGTCTCC GACGCGGCCA ACGGTGAGAA CACGTTCACC
GAGGCGCTGC CGCTGTGCTC GCTCGGGAAC ATCTACAACA ACTTCACGCA CGTCTTCACG
ACTGCCGCGA CCGGGATCAC CTCGATCGAG GACCTGCGCG GCAAGCGGGT GTCGCCCGGG
GCGGTCGGCT CGGCCTCGGA GGTCACCGCC GACCGGATCA TGCAGGCGGC CGGCCTCGAC
CCGCAGGCCG ACATCGAGCG TGCCCAGCTG GGGGTCGCGG AGACCGTCGC GGCGATCCAG
GACGGCACCG TCGACGCGGG CTTCTGGTCC GGCGGCCTGC CCACCGGCGC CATCGTCGAG
CTGGCCAACA ACGCCGACCT GGTCCTCATC CCGACCGGGG AGTACACCGA CGCGATGGCC
GAGCAGTACG GCGACTACTA CTTCACCGAG GAGATCCCGG CCAACACCTA CGAGGGCCAG
ACCGAGGCCT CGCCGCAGGT CGTCTCGCCG AACATCCTCG TCGCCCGCAC CGACATGGAC
GAGCAGCTGC AGCAGGACAT CACGCGGACG ATCTTCGAGA ACAAGGAACA GCTGCTCACC
GTGCACCCGG CGGCCGAGGA GCTCGACCCG GCGACGGCCG GTGAGGTCGC CTTCATCGAG
ACCTGCCCCG GCGCGCAGGC CTACTTCGAC TCGGTGGGCT GA
 
Protein sequence
MTSSPIPARP TRRLLGTALA SALLLTACGG GESGGTGGGE GAQAGGPLTF ATGGTGGVYY 
PYGGGIANLL SSELEGTTVT VQETNASVDN MQLLASGQAQ LAFGLGDVVS DAANGENTFT
EALPLCSLGN IYNNFTHVFT TAATGITSIE DLRGKRVSPG AVGSASEVTA DRIMQAAGLD
PQADIERAQL GVAETVAAIQ DGTVDAGFWS GGLPTGAIVE LANNADLVLI PTGEYTDAMA
EQYGDYYFTE EIPANTYEGQ TEASPQVVSP NILVARTDMD EQLQQDITRT IFENKEQLLT
VHPAAEELDP ATAGEVAFIE TCPGAQAYFD SVG