| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3252 |
|---|
| Symbol | |
|---|
| ID | 8754933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 3417243 |
|---|
| End bp | 3420398 |
|---|
| Gene Length | 3156 bp |
|---|
| Protein Length | 1051 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_003410228 |
|---|
| Protein GI | 284991674 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTCAC CCGGCCCCTT CCGCGCGCTG CCCCCTCAGG TCGACCTGCC CGCTCTGGAG
CAGGAGGTCC TGGGCCGCTG GGAGGCCGAC AAGGTCTTCG CCCGCACGCT GGAGGCCTCC
GCCGGCCGAC CGCAGTGGAA CGTCTACGAG GGCCCGCCGA CCGCGAACGG CCGCCCCGGC
ACCCACCACA TCGAGGCCCG CGCGTTCAAG GACGTCTTCC CGCGCTTCAA GACCATGCAG
GGCTGGCACG TGCCCCGCCG GGCCGGCTGG GACTGCCACG GCCTGCCGGT GGAGATCGCC
GTCGAGCAGG AGCTGGGCTT CGCCGGCAAG CCGGACATCG AGCGCTACGG CATCGCCGAG
TTCAACGCCC GGTGCCGGGA GTCCGTCGAG CGGCACGTCG CGGACTTCTC CGACCTCACC
CGGCGCATGG GCTTCTGGGT CGACTTCTCC ACCGCCTACT GGACGATGGA CCCGCGCTAC
ATCGAGAGCG TCTGGTGGTC GCTCAAGCAG GTCTTCGACA AGGGCCTGCT GGTCGAGGAC
CACCGGGTCG CGCCGTACTG CCCGCGCTGC GGCACCGGCC TGTCCGACCA CGAGGTGGCC
CAGGGCTACG AGTCCATCAC CGACCCGTCG GTGTACGTCC GGCTGCCGGT CACCGACGGC
GAGTGGGCCG GCAGGGCCGA CCTGCTGGTC TGGACGACGA CGCCCTGGAC GCTCCCGAGC
AACACCGCGG TCGCCGTGAA CCCCGACGTC ACCTACCTCG TGGCCCGCCG TGGCGAGGAC
ACCCTCGTGG TCGCCGAGCC GCTGCTGGGC GCCGTCTTCG GGGAGACCGA CGACGTCGAG
GTGCTGGCCC GCACCACCGG CCGCGACTGG GAGCGGACGC ACTACCGCCG TCCGTTCCAG
CTGGTCGGCT TCCCCGAGGG CGAGGACGCG CACTTCGTCG TCCTCGCCGA CTACGTGACC
ACCGACGACG GCACCGGGCT GGTGCACCAG TCCCCCGCGT TCGGCGCCGA TGACCTCGCC
GTCTGCCGCA GCTACGGCCT GCCTGTGGTG AACCCGATCG ACGCGACCGG GCACTTCCTG
GCCGAGATCC CGCTCGTGGG CGGCCACTTC TTCAAGGCCG CCGACGCCGC GCTGGTCGAG
GACCTGCAGT CTCGCGGTGT CCTCTGGCGC GAGCAGCGAT ACGAGCACAG CTATCCGCAC
TGCTGGCGCT GCCACACGCC GCTCATGTAC TACGCGCAGC CGTCCTGGTA CATCCGCACG
TCGGCGGTCA AGGACCAGCT GCTCGCCGAG AACGAGAAGA CGCACTGGCA CCCCGAGCAC
ATCCAGTGGG GCCGCTACGG CGACTGGCTG CGCAACAACG TCGACTGGGC GCTGTCCCGC
GACCGGTACT GGGGCACCCC GCTGCCGGTC TGGCGCAACG ACGCCGACCC GGGCCGCATG
GTCGTCGTCG GCTCGCTGGC CGAGTTGTCG GAGCTGACCG GCCGGGACCT GTCCGACCTG
GACCCGCACC GGCCGTTCAT CGACGAGGTG ACCTTCACGC TGCCCGGCGA GGAGGGCACC
TACCGGCGGG TGCCGCAGGT CATCGACGCC TGGTACGACT CCGGCGCGAT GCCCTTCGCC
CAGTGGGGCG CGCCGTACCG CAACCAGGCG GAGTTCCGGG CCGCCTACCC GGCGCAGTTC
ATCTGCGAGG CGATCGACCA GACCCGCGGC TGGTTCTACT CGCTGATGGC CGTCGGCACG
CTGGTGTTCG AGCAGAACTC GTACGAGAAC GTGCTGTGCC TGGGCCACAT CCTGGCCGAG
GACGGCCGGA AGATGAGCAA GCACCTGGGC AACATCCTCG AGCCCATCCC GCTGATGGAC
CGGCACGGCG CCGACGCCGT CCGCTGGTTC ATGCTGGCCG GGGGTTCGCC GTGGTCGGCC
CGCCGGGTCG GGCACGAGAC GCTGTCCGAG GTGGTCCGCA AGGTGCTGCT CACCTACTGG
AACACCGCCA GCTTCTTCAC CCTGTACGCC GAGACCAACG GCTGGGACCC GACCTCGAGC
CCCGCCCCGG CGCCGGCCGA GCGGCCGCTG CTGGACCGCT GGGCGCTGGC CACCCTGGCG
GAGGTCACCG AGGGCGTCAC CGCGGCGCTG GAGGACTTCG ACACCCAGGG TGCCGGCCGG
CTGATCGCGC AGTTCGTCGA CGACCTGTCC AACTGGTACG TGCGCCGCTC GCGCCGGCGG
TTCTGGGACG GCGACCCGGC GGCGCTGGCC ACGCTGCACG AGGTGCTCGA CGTGCTGACC
CGGCTGATGG CGCCGTTCAC GCCCTTCGTC ACCGAGGAGG TGTGGGCGCG CGCGGTGGCG
CCGGGGCGGA CCGACGCGGT CGACAGCGTG CACCTGGCCT CCTGGCCGCA GGTGGACGAG
GACGCACGGG ACGCCGCGCT CGTCGAGCAG GTGGCGCTGG TGCGCCGGCT GGTCGAGCTG
GGCCGCTCGG CGCGCACGTC GGCCAAGGTC CGCACCCGCC AGCCGCTGGC CCGTGCGGTC
GTGGCCGCCC CGGGCTGGGC GGAGCTGCCG CGCGACCTGG TGGCCGAGGT CGCCGACGAG
CTCAACGTCG CCGAGCTGAT GGACCTCTCC GCGGTCGGCG GCGAGCTGGT CGACGTCAGC
GTGAAGGTCG ACTTCCGCGC CGTCGGCCGC CGGCTGGGCA AGCAGGTGCA GGCGGTGGCC
AGGGCGGTCG CCGCCGCCGA CGCGCCGGCG CTGGTGGCCG CCTACCGCGG CGGGACGGCG
TCGGTCGAGG TCGACGGGGC GGCCGTGCCG CTGCAGGACG GCGACCTGGT CGTCACCGAG
ACCCCGCGCG AGGGCTGGAC CGTGGCCAGC GGCGGCGGGC TGACCGTCGC GCTGGACCTG
GCGCTGACCC CGGAGCTGGA ACGGGCGGGC CTGGTCCGCG AGGCCGTGCG GCTGGTGCAG
GAGGCCCGCA AGAACGGCGG GCTGGCGGTC AGCGACCGCA TCGAGCTGTG GTGGACGGCG
GACGGCGCGA TGGCCCAGGC GCTCACCGAG CACGGCCCCC AGGTGGCCGA CGAGGTGCTC
GCCGTCCGGG TGCACGCGCA GCAGCCCGGG GACGGCGACG GCGTCGAGGG CCCGGCCGGC
TCGCGGTTCT GGGTGGCCCG CGCCGGCACG CGGTGA
|
|---|
| Protein sequence | MSSPGPFRAL PPQVDLPALE QEVLGRWEAD KVFARTLEAS AGRPQWNVYE GPPTANGRPG
THHIEARAFK DVFPRFKTMQ GWHVPRRAGW DCHGLPVEIA VEQELGFAGK PDIERYGIAE
FNARCRESVE RHVADFSDLT RRMGFWVDFS TAYWTMDPRY IESVWWSLKQ VFDKGLLVED
HRVAPYCPRC GTGLSDHEVA QGYESITDPS VYVRLPVTDG EWAGRADLLV WTTTPWTLPS
NTAVAVNPDV TYLVARRGED TLVVAEPLLG AVFGETDDVE VLARTTGRDW ERTHYRRPFQ
LVGFPEGEDA HFVVLADYVT TDDGTGLVHQ SPAFGADDLA VCRSYGLPVV NPIDATGHFL
AEIPLVGGHF FKAADAALVE DLQSRGVLWR EQRYEHSYPH CWRCHTPLMY YAQPSWYIRT
SAVKDQLLAE NEKTHWHPEH IQWGRYGDWL RNNVDWALSR DRYWGTPLPV WRNDADPGRM
VVVGSLAELS ELTGRDLSDL DPHRPFIDEV TFTLPGEEGT YRRVPQVIDA WYDSGAMPFA
QWGAPYRNQA EFRAAYPAQF ICEAIDQTRG WFYSLMAVGT LVFEQNSYEN VLCLGHILAE
DGRKMSKHLG NILEPIPLMD RHGADAVRWF MLAGGSPWSA RRVGHETLSE VVRKVLLTYW
NTASFFTLYA ETNGWDPTSS PAPAPAERPL LDRWALATLA EVTEGVTAAL EDFDTQGAGR
LIAQFVDDLS NWYVRRSRRR FWDGDPAALA TLHEVLDVLT RLMAPFTPFV TEEVWARAVA
PGRTDAVDSV HLASWPQVDE DARDAALVEQ VALVRRLVEL GRSARTSAKV RTRQPLARAV
VAAPGWAELP RDLVAEVADE LNVAELMDLS AVGGELVDVS VKVDFRAVGR RLGKQVQAVA
RAVAAADAPA LVAAYRGGTA SVEVDGAAVP LQDGDLVVTE TPREGWTVAS GGGLTVALDL
ALTPELERAG LVREAVRLVQ EARKNGGLAV SDRIELWWTA DGAMAQALTE HGPQVADEVL
AVRVHAQQPG DGDGVEGPAG SRFWVARAGT R
|
|---|
| |