Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3198 |
Symbol | |
ID | 8754878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3352881 |
End bp | 3354347 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | RNA binding S1 domain protein |
Protein accession | YP_003410175 |
Protein GI | 284991621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.565242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCCA CCCAGGTCCG TCCTAACAGC ACCCCCCAGG TCGCCGTCAA CGACATCGGC ACCGCCGAGG ACTTCCTCGC CGCCATCGAC CAGACGATCA AGTACTTCAA CGACGGCGAC ATCGTCGAAG GCGTCATCGT CAAGGTCGAC CGGGACGAGG TGCTGCTGGA CATCGGCTAC AAGACCGAGG GCGTCATCCC CTCGCGCGAG CTGTCCATCA AGCATGACGT CGACCCCAAC GAGGTCGTCA GCGTCGGCGA CGAGGTGGAA GCCCTCGTCC TCCAGAAGGA GGACAAGGAA GGCCGCCTGA TCCTGTCCAA GAAGCGCGCC CAGTACGAGC GCGCCTGGGG CACGATCGAG GCGAAGAAGG AAGCCGACGA GGTCGTCACC GGCACCGTCA TCGAGGTCGT CAAGGGTGGC CTCATCCTCG ACATCGGCCT GCGCGGGTTC CTCCCCGCCT CGCTGGTCGA GATGCGCCGC GTGCGCGACC TGCAGCCCTA CGTGGGCCGC GAGCTCGAGG CCAAGATCAT CGAGCTCGAC AAGAACCGCA ACAACGTCGT CCTCTCCCGC CGGCAGTGGC TGGAGCAGAC CCAGTCCGAG GTCCGCAGCG AGTTCCTCAA CAAGCTCGCC AAGGGCCAGG TCCGCACCGG CGTCGTCTCC TCGATCGTCA ACTTCGGCGC GTTCGTGGAC CTGGGTGGGG TCGACGGCCT GGTGCACGTC TCCGAGCTGT CCTGGAAGCA CATCGACCAC CCGTCCGAGG TCGTCGAGGT CGGCCAGGAG GTCACCGTCG AGGTCCTCGA CGTCGACCTG GACCGGGAAC GGGTCTCGCT GTCGCTGAAG GCGACGCAGG AGGACCCGTG GCGTCAGTTC GCCCGGACCC ACCAGATCGG CCAGGTCGTG CCCGGCAAGG TCACCAAGCT GGTGCCCTTC GGTGCGTTCG TCCGCGTCGA CGAGGGCATC GAGGGTCTGG TGCACATCTC CGAGCTGGCC GAGCGCCACG TGGAGATCCC CGAGCAGGTC GTGCAGGTCG GCGACGAGAT CCTGGTCAAG GTCATCGACA TCGACCTCGA CCGCCGTCGG ATCTCGCTGT CGCTCAAGCA GGCAAACGAG GGCGTCGTCG GCGACGAGGA CACCTTCGAC CCGGCCGCCT ACGGCATGTC CGCGTCCTAC GACGAGCAGG GCAACTACAT CTACCCCGAG GGCTTCGACG CCGAGACCGG CGAGTGGCTC GAGGGCTACG ACGAGGCCCG CGAGACGTGG GAGCGGCAGT ACGCCGAGGC CCAGGCCCGC TACGAGGCGC ACCGCAAGCA GATCGCGGCG GCCAAGGAGG CCGATGCCGA GGCCGCGGCC GGTGGCAACT ACTCCAGCGG CGGCGAGGTC GAGGCCAGCG GCGACACCTC CGGCGGGACG CTCGCCAGCG ACGAGGCGCT CGCCGCGCTG CGGGCCAAGC TGGCCGGCGG CGAGTGA
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Protein sequence | MTSTQVRPNS TPQVAVNDIG TAEDFLAAID QTIKYFNDGD IVEGVIVKVD RDEVLLDIGY KTEGVIPSRE LSIKHDVDPN EVVSVGDEVE ALVLQKEDKE GRLILSKKRA QYERAWGTIE AKKEADEVVT GTVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGR ELEAKIIELD KNRNNVVLSR RQWLEQTQSE VRSEFLNKLA KGQVRTGVVS SIVNFGAFVD LGGVDGLVHV SELSWKHIDH PSEVVEVGQE VTVEVLDVDL DRERVSLSLK ATQEDPWRQF ARTHQIGQVV PGKVTKLVPF GAFVRVDEGI EGLVHISELA ERHVEIPEQV VQVGDEILVK VIDIDLDRRR ISLSLKQANE GVVGDEDTFD PAAYGMSASY DEQGNYIYPE GFDAETGEWL EGYDEARETW ERQYAEAQAR YEAHRKQIAA AKEADAEAAA GGNYSSGGEV EASGDTSGGT LASDEALAAL RAKLAGGE
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