| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3079 |
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| Symbol | |
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| ID | 8754755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 3230082 |
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| End bp | 3231752 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003410060 |
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| Protein GI | 284991506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.493465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA CCGACACCGC CGACCTGTGG TGGAAGAACG CCGTCGTCTA CTGCCTGGAC
GTCGAGACCT ACATGGACTG GAACGGCGAC GGCTGCGGGG ACCTGCCGGG TCTGGCCCAG
CGCATCGACC ACCTCGCCGA CCTCGGCGTG ACCTGCCTGT GGCTGATGCC CTTCTACCCG
ACCGCCGAGC GCGACGACGG CTACGACATC ACCGACTTCT ACGGCGTCGA CCGGCGGCTG
GGCACCCACG GCGACCTGGT CGAGGTCATC CGCACCGCCC AGGACCGCGG CATGCGGGTC
ATCGCCGACC TGGTCGTCAA CCACACCTCG GTCGAGCACC CGTGGTTCCA GCGGGCCCGG
CAGAGCCGCG ACGACCCGTT CCACGACTTC TACGTCTGGC GGGACGACGA GCCGCCGGAC
ACCTCCGACC AGGTCGTCTT CCCCGACCAG GAGAAGGGTG TCTGGACGTT CAACGAGCCG
ACCGGCGAGT GGTACCTGCA CAAGTTCTAC AAGGAGCAAC CCGACCTGAA CGTGGCCAAT
CCGCGGGTGC GGGACGAGGT GGCCAAGGTC ATGGGCTTCT GGCTGCAGCT GGGCCTGTCC
GGCTTCCGCG TCGACGCCGT CCCCTTCTTC CTGGAGACCG CCGGCACCGA CGGCGAGGCC
CTCCCGGAGC CGCACGAGTA CCTGCGCGAC CTGCGCTCGG TGGTCGGCCG GCGCACCGGC
GACGGCGTCC TGCTCGGCGA GGTGAACCTG CCCTACGAGC AGCAGCTGGA GTTCTTCGGC
GGCACCGACG GCGACGAGCT CACCATGCAG TTCGACTTCA TCGGGATGCA GGCCCTCTAC
CTGTCGCTCG CCCGCGCCGA CGCCGGACCA CTGGCCACCG CGCTGGCGGG CCGGCCGGCG
CTGGACCCCG ACTCGCAATG GGCCACCTTC GTGCGCAACC ACGACGAGCT CACCCTCGAC
AAGCTGACCG ACGACGAACG CCAGGAGGTG TTCGCCGCGT TCGGGCCTGA GGAGCGCATG
CAGGTCTACG GCCGCGGCCT GCGCCGCCGG CTGCCGCCGA TGCTGGACGG CGACCCGCGA
CGGGTCCGGA TGGTCTACAG CCTGCTGTTC TCCCTGCCCG GCACCCCGGT GCTCTTCTAC
GGCGAGGAGA TCGGCATGGG GGAGGACCTC GACGCCGAGG GGCGGCTGGC CGTCCGGACG
CCGATGCAGT GGACGTCGGG CCGCAACGGC GGTTTCTCCA CCGCCGACCC CGACCGGCTG
CCCGGTCCGG TGGTCGACGG CGGGTTCGCC CCGGAGTTCG TCAACGTGGC CGACCAGCGC
CGCGACGAGG ACTCGCTGCT GTCGTTCACC AAGCTGCTCA TCCGCCGCTA CCGTGAGTCG
CCGGAGCTGG GCTGGGGCGG GTTCGAGCTG CTCGAGCAGC CGCACCGCGA GGTGCTGGCC
CACCTGTGCA GCTGGGACGA CGGCGCGCTG GTCGCCGTCC ACAACCTCGG CCCCGAGCCG
CGCACCGTGC CGCTGATGCT CCCGGGCTGC GACGCCGGGC ACCGCCTGGA GGACCTGCTG
GTCACCCAGA CCACGCCGGT CGGCGAGGAC GGCGGGGTCG AGCTGACCCT CGACGGCTAC
GGGTACCGCT GGCTGCGCGT CGTCGGGCCG GACGACCGCC GGCTGGTCTG A
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| Protein sequence | MRITDTADLW WKNAVVYCLD VETYMDWNGD GCGDLPGLAQ RIDHLADLGV TCLWLMPFYP
TAERDDGYDI TDFYGVDRRL GTHGDLVEVI RTAQDRGMRV IADLVVNHTS VEHPWFQRAR
QSRDDPFHDF YVWRDDEPPD TSDQVVFPDQ EKGVWTFNEP TGEWYLHKFY KEQPDLNVAN
PRVRDEVAKV MGFWLQLGLS GFRVDAVPFF LETAGTDGEA LPEPHEYLRD LRSVVGRRTG
DGVLLGEVNL PYEQQLEFFG GTDGDELTMQ FDFIGMQALY LSLARADAGP LATALAGRPA
LDPDSQWATF VRNHDELTLD KLTDDERQEV FAAFGPEERM QVYGRGLRRR LPPMLDGDPR
RVRMVYSLLF SLPGTPVLFY GEEIGMGEDL DAEGRLAVRT PMQWTSGRNG GFSTADPDRL
PGPVVDGGFA PEFVNVADQR RDEDSLLSFT KLLIRRYRES PELGWGGFEL LEQPHREVLA
HLCSWDDGAL VAVHNLGPEP RTVPLMLPGC DAGHRLEDLL VTQTTPVGED GGVELTLDGY
GYRWLRVVGP DDRRLV
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