| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3071 |
|---|
| Symbol | |
|---|
| ID | 8754747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 3218123 |
|---|
| End bp | 3219214 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_003410052 |
|---|
| Protein GI | 284991498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.178624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCA TCTCCGTCCC GCAGGCCTTC AACGAGGACG ACCTGTACGT GGACGTGGCG
TCGATCTTCG ACGTCCCGCT GTACCTCAAG TGCGAGGGCT TCAACTTCGC CGGCTCGATC
AAGCTCAAGG CCGCCACCGA GATGGTCGAG GCAGCCGAGC GGGACGGCGT CCTGACGCCT
GACTCCGTGC TGATCGAGTC CTCGTCGGGC AACCTCGGCG TCGCGCTGGC CATGATCGCG
GCCAGCCGCG GCTACCGCTT CCTGTGCGTG ACCGACCCGC GCTGCAACCT GTCGACCCGG
CGGCTGATGG AGGCGCTGGG CAGCCAGGTC CACATCGTCA CCGAGCCTGA CCCGGTGGGC
GGTTTCCTGG GCGCCCGGAT CGACTACGTC GAGGCGATGT GCGCCTCCGA CAGCCGCTTC
GTCTGGCTGA ACCAGTACCG CAACCCGGGC AACTGGCGGG CCCACCTCAA GCGGACCGCA
CCGGCGATCG CCCGTGACTT CCCCGACCTC GACGTGCTGT TCGTGGGCGC TGGCACCACC
GGGACCCTCA TGGGCTGTGC GCGCTTCTTC CGCGAGTGGC ACCGTCCGGT GCACGTCGTC
GCGGTGGACG CCGTCGGGTC GGTGACCTTC GGCGGACCGC AGTCGCGGCG GATGATCCCC
GGGCTGGGCA GCGGGGTCCG TCCCGCGCTG CTCGACGAGT CCTACATCGA CGAGGTGGTG
CTGGTCGAGG AGGCCGACAC CCTCCACGCC TGCCACCGGC TGGCCCACCG CGGCTTCCTC
TTCGGCGGCT CCACCGGCAC CGTGGTCAGC GGCGCGAAGA GCTGGCTGGA CCGCAACGGC
AGGCCGGGCA TCACCGCGGT GGCCATCGCC CCCGACCTGG GCGAGCGCTA CCTGGACACC
GTCTACCAGA CCAACTGGCT CGAGGACCTC TTCGGGAAGG ACGTGCTGGA CTCGGTCCGG
GCGGCCCACC CGTTCCCGGA GAGCCTGTCG CGGCCGAGCG AGGCGGGCGC CGATCCGGGT
CACGGCACCC TGGTCACCTC CCGGCCGGAC GCCGACGTCG TCCCGCTGCC CCTGCCGCGG
TCGGGGAACT GA
|
|---|
| Protein sequence | MTVISVPQAF NEDDLYVDVA SIFDVPLYLK CEGFNFAGSI KLKAATEMVE AAERDGVLTP
DSVLIESSSG NLGVALAMIA ASRGYRFLCV TDPRCNLSTR RLMEALGSQV HIVTEPDPVG
GFLGARIDYV EAMCASDSRF VWLNQYRNPG NWRAHLKRTA PAIARDFPDL DVLFVGAGTT
GTLMGCARFF REWHRPVHVV AVDAVGSVTF GGPQSRRMIP GLGSGVRPAL LDESYIDEVV
LVEEADTLHA CHRLAHRGFL FGGSTGTVVS GAKSWLDRNG RPGITAVAIA PDLGERYLDT
VYQTNWLEDL FGKDVLDSVR AAHPFPESLS RPSEAGADPG HGTLVTSRPD ADVVPLPLPR
SGN
|
|---|
| |