Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3053 |
Symbol | |
ID | 8754729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3197766 |
End bp | 3200249 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_003410034 |
Protein GI | 284991480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.050716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACG ACGACCTCGA TCAGCGCAGC CGGCTGGTCG TGGTGGGCAA CGGGATGGCC GGCGCCCGCC TGGTCGAGGA GGTGCTCGAG CGCGGCGGGG CCGAGCAGTT CCGGATCACC GTCTTCGGCG ACGAGCCGCA CGGCAACTAC AACCGGATCA TGCTCTCGCC GGTGCTGGCC GGGGAGTCGC ACGAGGACGA CATCGTCCTC AACAGCCACG ACTGGTACGC CGACAACGGC GTGCTGCTGC GCGCCGGCGT CCGGGTCGAG CGCATCGACA CCGCCGCCAA GACGGTCCTC GGCTCCGACG GCTCGGTCAC GCCCTACGAC CACCTGGTGC TGGCCACCGG CAGCTACTCG TTCATCCCAC CGATGACCGG GGTCCGGCAG GAGGACGGCG GCCTGCTGCC CGGCGTCTTC GGGTTCCGCA CCATCGACGA GACGCGCGCC ATGCTGGAGG CCACCGGCCG CTGCCGGCGC GCGGTGGTCA TGGGCGGCGG CCTGCTCGGG CTGGAGGCGG CGCGCGCCCT GCAGGGGCAC GGGCTGCAGG TCGAGCTCGT GCACGCCATG CCGTACCTGA TGAACGCCCA GCTCGACGCC GAGGCCGGCG CCATCCTCAA GAGGAGCGTC GAGTCCCTCG GCATCGGCGT GCACCTCGAC GTCCTGGCCA CCGAGGTGCT CGGCGCCGAG CACGTCGAGG GGGTGGTCCT GAAGGACGGC CGGCGGCTGG ACTGCGACCT GCTCGTCGTC GCCACCGGCG TCCGGCCGCA CACCGACGTC GCGGTGCTCT CGGGCCTGGA GGTCGAGCGC GGCATCGTCG TCGACGACCA GCTGCGCACC GACGACCCCG ACGTCTACGC CATCGGCGAG TGCGCCCAGC ACCGCGGTTC GGTCTACGGC CTGGTGCAGC CGGCCTGGGA GCACGCCCGC GTGCTGGCCG ACGTGCTGAC CGGCACGGAC CCGGACGCGG AGTACCACGG CAGCCGGACG GCGACCAAGC TCAAGGTCGC CGGCGTCGAC GTCGCCACCA TGGGCGTCAA CACCCCCGAG CGGGACGACG ACGAGTTCCT GGTGATCTCC GAGCCCAGGC GCGGGGTGCA CCTGTCGGTG GTCATCCGCG ACGACGTGCT GGTCGGGGCC ACGCTGCTCG GCGACACCCG CAAGGTCGCC TACCTGACCC AGGCCTTCGA CCGCGGCGCG CCGCTGCCCG AGGAGCGGAT CCGGCTGCTG GTCGACCTCT CCGACGGCGC CCCGGAGGTG GGCGTCGCCG AGATGCCCGC CGACTCGCAG GTCTGCAACT GCAACGGGGT GTCGAAGGGC GACATCTGCG GTGCCGTCGC CGGCGGGTGC GGCAGCGTCG GCGCGGTCAT GGACGCCACC CGGGCCGGCA AGGGCTGTGG CTCGTGCAAG GGCCTGGTGA AGCAGGTCGT CGAGTGGGCC GCCGACGGCG ACCTCACCGA GGACCCGGCC GCCTCGTACT ACGTGCCGGG CATCCCGATG GCCAAGCCCG AGCTCGTCGC CGCCATCCGC GAGCAGGACC TGCGCAGCGT CTCGGCGGTC TTCACCGCGC TCGCCCCCGG CGGGCAGGAC GACGCGAAGT CGAAGATGGG CCTGACCTCG CTGCTGAAGA TGCTCTGGGG CGTGGACTTC GTCCCGGAGA AGGACGGCGA GTTCATCAAC GACCGGGTGC ACGCCAACAT CCAGCGCGAC GGCACCTTCT CCGTCGTCCC GCAGATGAAG GGCGGCGTGA CCACCCCGGC CCAGCTGCGC CGGATCGCCG AGGTCGCCGA GAAGTACGAG GTCCCGATGG TGAAGGTGAC CGGCGGGCAG CGGATCGACC TGCTCGGCGT CCGCAAGGAG GACCTGCCGG CGGTGTGGGA CGACCTCGGC ATGCCGTCCG GGTACGCCTA CGGCAAGAGC TTCCGCACCG TGAAGACGTG CGTGGGCAGC GACTTCTGCC GGTTCGGCCT CGGCGACTCC ACCCAGCTCG GCATCGACCT GGAGACCCGG TTCCAGGGCA TCGAAGGCCC GGCGAAGATG AAGCTCGCCG TGGTCGGCTG CCCGCGCAAC TGCGCCGAGG CCTACGTCAA GGACGTCGGC GTCGTCGCCG TCGGCAACGG GAGGTGGGAG GTCTACGTCG GCGGCGCCGC CGGGGCCACC GTCCGCAAGG GCGACCTGCT GGCCACCGTC GACTCCCCGG AGGAGGTGCT CCGGCTCACC GGCCGCTTCC TGCAGTACTA CCGGGAGAAC GCCAACTGGC TGGAGCGCAC CTACGACTTC GTGCCGCGGG TCGGCCTGGA GCGGATCCGG TCGGTGCTGC TGGAGGACAG CGAGGGGATC GTCGCCGAGC TCGACGCCGG GATCCAGCGG TCGATCGACG CCTACACCGA CCCGTGGGGC CAGGACGGCA GGGAGCCTGC GACCCCCGGC CAGTTCCGCT CCTCGCTGCC GCTGGTCGCG CTGCCGAAGG TGCCGGTGCG ATGA
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Protein sequence | MDDDDLDQRS RLVVVGNGMA GARLVEEVLE RGGAEQFRIT VFGDEPHGNY NRIMLSPVLA GESHEDDIVL NSHDWYADNG VLLRAGVRVE RIDTAAKTVL GSDGSVTPYD HLVLATGSYS FIPPMTGVRQ EDGGLLPGVF GFRTIDETRA MLEATGRCRR AVVMGGGLLG LEAARALQGH GLQVELVHAM PYLMNAQLDA EAGAILKRSV ESLGIGVHLD VLATEVLGAE HVEGVVLKDG RRLDCDLLVV ATGVRPHTDV AVLSGLEVER GIVVDDQLRT DDPDVYAIGE CAQHRGSVYG LVQPAWEHAR VLADVLTGTD PDAEYHGSRT ATKLKVAGVD VATMGVNTPE RDDDEFLVIS EPRRGVHLSV VIRDDVLVGA TLLGDTRKVA YLTQAFDRGA PLPEERIRLL VDLSDGAPEV GVAEMPADSQ VCNCNGVSKG DICGAVAGGC GSVGAVMDAT RAGKGCGSCK GLVKQVVEWA ADGDLTEDPA ASYYVPGIPM AKPELVAAIR EQDLRSVSAV FTALAPGGQD DAKSKMGLTS LLKMLWGVDF VPEKDGEFIN DRVHANIQRD GTFSVVPQMK GGVTTPAQLR RIAEVAEKYE VPMVKVTGGQ RIDLLGVRKE DLPAVWDDLG MPSGYAYGKS FRTVKTCVGS DFCRFGLGDS TQLGIDLETR FQGIEGPAKM KLAVVGCPRN CAEAYVKDVG VVAVGNGRWE VYVGGAAGAT VRKGDLLATV DSPEEVLRLT GRFLQYYREN ANWLERTYDF VPRVGLERIR SVLLEDSEGI VAELDAGIQR SIDAYTDPWG QDGREPATPG QFRSSLPLVA LPKVPVR
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