| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2967 |
|---|
| Symbol | |
|---|
| ID | 8754639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3100515 |
|---|
| End bp | 3103199 |
|---|
| Gene Length | 2685 bp |
|---|
| Protein Length | 894 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type |
|---|
| Protein accession | YP_003409950 |
|---|
| Protein GI | 284991396 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.547445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC TCGACGACGC GGACCCGGCC GAGACGCAGG AGTGGATCGA CGCGCTGGAC
TCGGTGCTGG CGTTCGAGGG TGCGGAGCGG GCGTTCCACC TGCTCGACGA GGTGGTCGCC
GAGGCCCGCC GCAAGGGCGC GCCGGTGCCC TACAGCGCCA CCACGCCCTA CCTGAACACC
ATTCCGCCGG ACAAGGAGGA CCGGCACCCC GGCGACCGCG CCATCGAGCA CCGGATCCGC
TCGTTCATCC GGTGGAACGC GCTGGCCATC GTGCTGCGGT CGAACAAGGA GTCCTCGGAG
CTCGGCGGCC ACATCGCCAG CTTCCAGTCG GCGGCGACGC TCTACGACGT CGGGTTCCAG
CACTTCTGGC ACGCGCCGAC CGAGACCCAC GGCGGTGACC TGCTGTTCAT CCAGGGCCAT
TCCTCGCCGG GCATCTACGC CCGCTCGTTC CTCGAGGGCC GGCTCAGCGA GGAGCAGCTG
CTTGGGTTCC GCCAGGAGGT CAGCGGCGGC GGGCTGTCGT CCTATCCGCA CCCGTGGCTG
ATGCCGGACT ACTGGCAGCT GCCGACGGTG TCGATGGGGC TCGGCCCGCT CATGGCGATC
TACCAGGCGC GGTTCCTCAA GTACCTGAAG TGCCGCGGGC TGTCCGACAC CACCGGGCGG
AAGGTCTGGG CGTTCCTCGG TGACGGGGAG ACCGACGAGC CCGAGTCGCT GGGCGCCATC
GGGCTGGCCG CGCGGGAGAA GCTGGACAAC CTGGTCTTCG TCGTCAACTG CAACCTGCAG
CGGCTGGACG GGCCGGTGCG CGGCAACGGC AAGATCATCC AGGAGCTGGA GGGCATCTTC
CGCGGCGCCG GGTGGAACGT CATCAAGACC ATCTGGGGCA GCAGCTGGGA TCCGCTGATC
GCCCGGGACA CCTCCGGCCT GCTGCTCAAA CGGATGGAGG AGGCCGTCGA CGGGGAGTAC
CAGGACTTCA AGTCCAAGAA CGGCGCCTAC GTCCGGGAGC ACTTCTTCGG CAAGTACCCC
GAGCTGCTGG AGCTGGTCGC CGACATGAGC GACGACGAGA TCTGGGCGCT GACCCGCGCG
GGGCACGATC CCGGCAAGGT CTACGCCGCC TACAGCGCCG CGGTGCAGAC CGTGGGGCAG
CCGACCGTGA TCCTGGCCAA GACGGTCAAG GGCTACGGGA TGGGCGAGGC AGGCGAGGGG
CAGAACATCA CCCACCAGCA GAAGAAGGTC GCGGGCGCGG CGCTGGCCCG GTTCCGGGAC
CGCTTCGACA TCCCCGTCTC CGACGAGCAG CTCGAGGAGG TGCCCTTCCT GCGCTTCCCG
GAGGACAGCG CGGAGATGCG CTACCTCCGG GAGCGGCGGG CCGCGCTGGG CGGGCCCATG
CCAGTGCGCC GGCGGCGCTC AAGCGAGACC CTGCAGGTCC CGGGCCTCGA TGCTTTCGGC
GGGCAGCTGG TGCCGACCGA GGGCCGGCAG ATCTCCACCA CGATGGCATT CGTCCGGATC
CTCAACACGC TGCTGCGGGA CAAGGCGATC GGCAAGCGGG TGGTCCCGAT CGTGCCCGAC
GAGTCGCGCA CCTTCGGGAT GGAGGGGATG TTCCGGCAGT TCGGCATCTT CAGCCAGGTC
GGCCAGCTCT ACCGGCCGCA GGACGCCGAC CAGCTCATGT ACTACCGGGA GGCCCCGGAC
GGGCAGATGC TGCAGGAGGG CATCAACGAG GCCGGGGCGA TGTCGTCGTG GATCGCCGCG
GCGACGTCCT ACAGCCTGAG CGACACCCCG ATGATCCCGT TCTACATCTA CTACTCGATG
TTCGGCTTTC AGCGGGTCAT GGACCTGGCC TGGGCGGCCG GGGATTCCCG GGCGCGCGGC
TTCCTGCTCG GTGCCACCGC CGGGCGGACC ACGCTCAACG GCGAGGGCCT GCAGCACGAG
GACGGCCACA GCCACCTGCT GTCCTCGGCG ATCCCCAACT GCGTCTCCTA CGACCCGACC
TTCCACTACG AGGTCGCGGT GATCGTCCAG GACGGGCTGC GCCGGATGGT CGCCGAGCAG
GAGGACGTCT TCTACTACCT CACCCTCATG AACGAGAACT ACGAGCACCC GGGGATGCCC
GAGGGCTCGC AGGAGGGGAT CCTGCGCGGG CTGTACCTGC TGCGCGAGGG GCCGGCCGCG
CCGTCGGGCC GCAGCCGCAA GGCCGCGCGG CCGCGGGTGC AACTGCTGGG CAGCGGCACG
ATCCTGCGCG AGGTCCTGGC CGCCGCCGAC CTGCTCGCCG CCGACTTCGG CGTGGACGCC
GACGTGTGGA GCGCCCCCAG CTTCACTGAG CTGCGGCGGG ACGGGATGGC GGTGGAGCGG
TGGAACCTGC TGCACCCGAC CGAGCAGCCA CGGCGCAGCT GGGTCGAGCA GTGCCTCGCC
GACCGGCAGG GGCCGGTCAT CGCCGCCAGT GACTACGTGC GGGCCTTTGC CGACCAGATC
CGCCCCTTCG TGCCGGGCAG CTACCGGGTG CTGGGCACCG ACGGCTACGG GCGCTCGGAC
TACCGCCGCA ACCTGCGTCG CTTCTTCGAG GTCGACCGCG GTGCGGTGGC CGTGGCGGCG
CTGGCCTCGC TCGCCGCCGA GGGCGCCGTC CCGGCCACGA CGGTGGCCGA CGCGATCCGC
CGGTACGGCA TCGACCCCGA GGCGCCGCCG CCGTGGACGG TCTGA
|
|---|
| Protein sequence | MAMLDDADPA ETQEWIDALD SVLAFEGAER AFHLLDEVVA EARRKGAPVP YSATTPYLNT
IPPDKEDRHP GDRAIEHRIR SFIRWNALAI VLRSNKESSE LGGHIASFQS AATLYDVGFQ
HFWHAPTETH GGDLLFIQGH SSPGIYARSF LEGRLSEEQL LGFRQEVSGG GLSSYPHPWL
MPDYWQLPTV SMGLGPLMAI YQARFLKYLK CRGLSDTTGR KVWAFLGDGE TDEPESLGAI
GLAAREKLDN LVFVVNCNLQ RLDGPVRGNG KIIQELEGIF RGAGWNVIKT IWGSSWDPLI
ARDTSGLLLK RMEEAVDGEY QDFKSKNGAY VREHFFGKYP ELLELVADMS DDEIWALTRA
GHDPGKVYAA YSAAVQTVGQ PTVILAKTVK GYGMGEAGEG QNITHQQKKV AGAALARFRD
RFDIPVSDEQ LEEVPFLRFP EDSAEMRYLR ERRAALGGPM PVRRRRSSET LQVPGLDAFG
GQLVPTEGRQ ISTTMAFVRI LNTLLRDKAI GKRVVPIVPD ESRTFGMEGM FRQFGIFSQV
GQLYRPQDAD QLMYYREAPD GQMLQEGINE AGAMSSWIAA ATSYSLSDTP MIPFYIYYSM
FGFQRVMDLA WAAGDSRARG FLLGATAGRT TLNGEGLQHE DGHSHLLSSA IPNCVSYDPT
FHYEVAVIVQ DGLRRMVAEQ EDVFYYLTLM NENYEHPGMP EGSQEGILRG LYLLREGPAA
PSGRSRKAAR PRVQLLGSGT ILREVLAAAD LLAADFGVDA DVWSAPSFTE LRRDGMAVER
WNLLHPTEQP RRSWVEQCLA DRQGPVIAAS DYVRAFADQI RPFVPGSYRV LGTDGYGRSD
YRRNLRRFFE VDRGAVAVAA LASLAAEGAV PATTVADAIR RYGIDPEAPP PWTV
|
|---|
| |