| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2906 |
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| Symbol | |
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| ID | 8754578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | + |
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| Start bp | 3033257 |
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| End bp | 3034990 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003409899 |
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| Protein GI | 284991345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCATT CGAATCGCGA GCACGCCTCA CCCTTCAGCG CGCCGAGCGA CGGGCCGAAA
GGTGGCCCTG CACCGGGCGC CGGGTCGGCC GTTGGACGCG AGCACGTCAA CCCGCCGCAG
ACGGACCGAG TGGTCTTCGG CGTCTCCCTG GCGCTGGTGT TGGCGTTCGC GCTCTGGGGG
GTGCTCGCCA GCGACAGCCT GTCGAGCGCT GTGAGCACCG CTTTCAGCAC GGTCATCACC
AACGCCGGCT GGGTCTTCGT CCTGACCAGC TCGGGGTTCG TCGCGCTGGC TGCGTTCCTG
GCGCTGTCCC GCTACGGCCG CATCCGGCTG GGGAGGGACG ACGAGCGACC GGAGTTCAGC
ACGGGCTCGT GGATTTCCAT GCTCTTCGCG GCCGGCATGG GCATCGGTCT GCTCTTCTGG
GGCGTCGCCG AGCCGCTGTC CCACCTCGCG GCCGCCCCAC TCGGCCTCGA GGAGGCGGGG
ACTCCGGAGG CCGCCCGCCT GGGGCTGCAG TACACGATCT TCCACTGGGG CCTGCACCCC
TGGGCGATGT ACGCCGTCAT GGCGATGGCC CTGGCCTACG GCGTCTTCCG CAAGGGGCGG
CCGAGCCTGG TCAGCTCCGC GGTCGTCCCG CTGGTCGCCG AGCACCGCAC CGGCGTCCGC
CGCGCCGTTG ACATCCTCGC CATCTTCACC ACCGTGTTCG GCGCGGCGAC CTCGCTCGGC
CTCGGCGCGC TCCAGGTCAA CAGCGGTCTG GCGGCCAACT ACGGCGTTCC GCGGAACAAC
GGCGTGGCCG TGGCCATCAT CGCCGGCCTC GCGCTGCTCT ACGTCCTGTC CGCGGTCAGT
GGCGTGCACA AGGGCATCAA GCTGATCAGC AACACCAACG TGGTGCTGGC CGCCCTGCTG
GTGGCCTTCG TCTTCGTGCT GGGCCCCACC ACGCACCTGT TCAACACCAT CACCGACGCC
ACCGGGGACT ACCTGGCCGC TCTTCCCGCC ATGAGTCTGG CCTCGGGCGC CTGGGGCGGT
CAGGAGTGGC TGGCCGGCTG GACGTTGTTC TACTGGGCGT GGTGGATGTC CTGGACGCCG
TTCGTGGGGA CGTTCATCGC GCGCATCTCT CGCGGCCGCA CGATCCGGCA GTTCGTCACC
TTCGTGATCA TCATTCCGAC CATGGTCAGC ATCGTGTGGT TCGGCGTCCT GGGCGGCACC
GCCACCCACC TGGAGCTCAC CGGCCAGGCC GAGCTCAGCC AGGCCCTGAC CGACCAAGGC
ACCGAGGGAG CACTGTTCGC CCTGCTCGGC GAGTTCCCGC TCGTCACACT CACCGTGCTG
CTCGTGATGG TGCTCATCAC GCTGTTCTTC GTCAGCAGCG CCGACTCCGC GTCCATGGTC
CTCGGCATGC TGTCGCAGCG GGGCACGACC TCGCCCGCCC GCGCGGTAGT CATCCTCTGG
GGCGTGTCCA TCGCGGCCGT CGCCGCAGCA CTCACCCTCG CCGGTGGGCT CGAGGTCATC
CAGTCGGCCA CCATCCTGGT GGCGATGCCC TTCGTGGTGG TGCTCATCGC CATCTGCATC
AACCTGGTTC GCGAGCTGCG CCGGGAGCCC TACACCTCGA CGCTCGACCC CCAGGTTCGG
CGGGCCGTCA TCGCCCACCT CCACGAGATC CCGCACCCGA ACGGATCACC GCCCACCTCA
CCCGGAGTCC CGGTGCTCAC CGACGCCGAC CGTGAGCCGG CCGGCCACCA GTAG
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| Protein sequence | MEHSNREHAS PFSAPSDGPK GGPAPGAGSA VGREHVNPPQ TDRVVFGVSL ALVLAFALWG
VLASDSLSSA VSTAFSTVIT NAGWVFVLTS SGFVALAAFL ALSRYGRIRL GRDDERPEFS
TGSWISMLFA AGMGIGLLFW GVAEPLSHLA AAPLGLEEAG TPEAARLGLQ YTIFHWGLHP
WAMYAVMAMA LAYGVFRKGR PSLVSSAVVP LVAEHRTGVR RAVDILAIFT TVFGAATSLG
LGALQVNSGL AANYGVPRNN GVAVAIIAGL ALLYVLSAVS GVHKGIKLIS NTNVVLAALL
VAFVFVLGPT THLFNTITDA TGDYLAALPA MSLASGAWGG QEWLAGWTLF YWAWWMSWTP
FVGTFIARIS RGRTIRQFVT FVIIIPTMVS IVWFGVLGGT ATHLELTGQA ELSQALTDQG
TEGALFALLG EFPLVTLTVL LVMVLITLFF VSSADSASMV LGMLSQRGTT SPARAVVILW
GVSIAAVAAA LTLAGGLEVI QSATILVAMP FVVVLIAICI NLVRELRREP YTSTLDPQVR
RAVIAHLHEI PHPNGSPPTS PGVPVLTDAD REPAGHQ
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