| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2851 |
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| Symbol | |
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| ID | 8754523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | + |
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| Start bp | 2972518 |
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| End bp | 2974320 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003409850 |
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| Protein GI | 284991296 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.152332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCCG ACGACCCCGA GCGCGCCACC CCTGCCGCTC CCCGAGACCC CCGGGAGCAC
ACCCGAGCCG CCGACGGCGA CGTGACGGTC GAGGAGACGG TCCTCGTCAC CCCCCGCTAC
GTCCACGCCG CGCCCGATGA CGACCGGATG CACCCGCGAG CCGCCGACGT GGACCACCCG
GTCGACAGGA CCGTCTTCGT CACCGGCCTC GCTGTGACCG TGGCGTTCGT GCTCTGGGGT
GTGCTCTCGC CGACGTCGTT GGCCACGGCT GCCTCCTCGG TCCTGGCGAA GATGATCGAC
GCCACCGGCT GGGTGTACGT GCTCGTGACG GTCGGCTTCG TCGCGCTCAT GCTGCTGCTC
GCGCTCTCGC GCTACGGGCG GATCCGGTTG GGCCGCGACG ACGAGCGGCC GGAGTTCAGC
ACCGTCTCCT GGATCTCGAT GATGTTCGCC ACCGGGATGG GCATCGGGCT GATCTTCTGG
GGCGTCGCCG AGCCGCTGTC GCACCTGCTC ACGCCGCCGT TGGGGCTCGT CGAGGCCGCG
ACGCCGGAGT CCGCCCAGCT CGGCATGGAG TACACGATCT TCCACTGGGG CCTGCACCCG
TGGGCGCTGT ACGGCGTCGT CGGGCTCGCC CTGGCCTACG CGACGTTCCG CAAGGGCCTG
CCCAACCTGC TCAGCTCGAT CGTCTTCCCG CGGAAGGACC CCGCGCACCC TGCCCGCCGG
GCCGTCGACA TCTTCGGCCT GTTCATCACC ACCTTCGGGG CGGCCACGTC CCTGGGGCTG
GGCGCCCTCC AGATCAACAG CGGGCTGACG CGGGTCTTCG ACGCCCCCCA GAGCAACACC
GTCTCCATCG TGGTGATCGT CGTGCTGACC GCCCTGTTCG TGGTCTCCGC GGTCAGTGGC
ACCGAGCGGG GTATCAAGTG GCTGGCGAAC ACCAACGCCG GGTTGGCCGT CGGGATCCTG
GTCTTCGTGT TCGCCTTCGG GCCCACGATC TTCCTGATGA ACACCTTCGT CGAGTCCTTC
GGCGGCTACC TGGCTCACTT CGTGCCCATG TCGTTCCGCA CCGGTGCCAA TGGTGGCGGC
GAGTGGCTCG CCGGCTGGAC GATCTTCTAC TGGGCGTGGT GGATGTCGTG GGCCCCGTTC
GTGGGCACCT TCATGGCCCG GATCTCCCGA GGGCGGACGA TCCGCGAGTT CGTGATCTGC
GTGTTGATCG TCCCGACCCT GGTCAGCACC GTCTGGTTCG TGGTGATGGG TGGCACCGCC
ATCCGGTTCC AGCTGAGCGG GGTCACGGAC ATGGCCGCGT CACTGGACAC CGGCGTCGAG
AACACCCTGT TCGCCATGCT CGACGCGATG CCGTTCTCGA CGCTCACCGC GGTGCTCGTC
GTCGTCCTGA TCATGCTGTT CTACGTCGCC GGAGCCGACG CGGCGTCCCT GGTGCTCGGG
ATGCTCTCCC AGGGCGGCTC GCTCCACCCC CGGACCTGGC TGGTGGTGAC GTGGGGATCG
ATGATCGGCG CGGTCGCGAT CGCCCTGCTG CTCGCCGGAG GTCTGGAAGC GATCCAGACC
ACGGTGATCG TGATCGGGGT CCCGTTCCTG GTCGTCATGC TCGGTGTCTG CTACAGCCTG
CTCAAGCAAC TGCGCAGCGA GCCGGTGGTC ACCACGGTCC CGCCTGGTGT CCGCACGGTG
GTCGCGGAGA TGCGATCGAA CACGGTCCAG CCGGACCCGG CCCAGCAGCC GACGCCGGCC
GGCCCCGAGA ACGGCGCCGC CGCTCCCACC CGCGAACCGA CGGCGTCACA GACACCGACC
TGA
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| Protein sequence | MSPDDPERAT PAAPRDPREH TRAADGDVTV EETVLVTPRY VHAAPDDDRM HPRAADVDHP
VDRTVFVTGL AVTVAFVLWG VLSPTSLATA ASSVLAKMID ATGWVYVLVT VGFVALMLLL
ALSRYGRIRL GRDDERPEFS TVSWISMMFA TGMGIGLIFW GVAEPLSHLL TPPLGLVEAA
TPESAQLGME YTIFHWGLHP WALYGVVGLA LAYATFRKGL PNLLSSIVFP RKDPAHPARR
AVDIFGLFIT TFGAATSLGL GALQINSGLT RVFDAPQSNT VSIVVIVVLT ALFVVSAVSG
TERGIKWLAN TNAGLAVGIL VFVFAFGPTI FLMNTFVESF GGYLAHFVPM SFRTGANGGG
EWLAGWTIFY WAWWMSWAPF VGTFMARISR GRTIREFVIC VLIVPTLVST VWFVVMGGTA
IRFQLSGVTD MAASLDTGVE NTLFAMLDAM PFSTLTAVLV VVLIMLFYVA GADAASLVLG
MLSQGGSLHP RTWLVVTWGS MIGAVAIALL LAGGLEAIQT TVIVIGVPFL VVMLGVCYSL
LKQLRSEPVV TTVPPGVRTV VAEMRSNTVQ PDPAQQPTPA GPENGAAAPT REPTASQTPT
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