| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2736 |
|---|
| Symbol | |
|---|
| ID | 8754408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 2847135 |
|---|
| End bp | 2848823 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydD |
|---|
| Protein accession | YP_003409740 |
|---|
| Protein GI | 284991186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTCTC GTCCGGCGGC GCACGGCCCC GTGGCACGGG TGCTGGCCCG GCCCGGACCC
CGCCGGCTGG CTCTGGCCTG CGCCGCCCTG GCCGCGCTCA CCGCCGTCCT GCTCGTGGTG
CAGTGGGCGC TGGTCGCCGC CGTGGTCAGC GCGGTGTTCG CCGGGCGGTC CACCCCCGGC
GACCTGCTCG GCGCCCTCGC CGGAGCCCTG GCCGCGTGGC TGGCGCGGGC CGGCCTGCTG
GCCCTGCGGG AGCTGCTGGC GGCACGCACG TCGGCGCGGA CCCGGCACGA GGTCCGCAGC
GAGCTGGTGG GCAAGATCCT GCGGCTGGGC CCCGCGCTGA TGGCGGGGGA GCGGGCCGGG
GAGCTGGTCA CGACGGCCAC GGAGGGGGTC GGCAAGCTCG ACGGCCTCGT GGCGCGCCTG
CTGCCCGGCG CGGTGTGGGC CGCGGTGCTC CCGCCGCTGC TGGCCGGCAC CGTGCTGGTG
CTGGACCCGC CGAGCGGCGC GCTGCTGCTG GCCACCGGGC CGCTGCTGGT GTTCTTCCTC
TGGCTGGTCG GCTCCCTGGC GGCGCGCTCG GCCCGCGAGC AGTGGACGAC GCTGGGGCAG
CTCGGCGCCG TGCTCGTCGA CACCGTGCGG GTGCTGCCGA CCCTCGTCGC CTACGGCCGG
GCCGGACGGA GCCGGCGCTG GCTCGCCGAC GTCGGGGAGG CGCACCGCGC GGCCACCATG
CGGGTGCTGC GGACGGCCTT CCTGTCCGGC TTCGTCCTGG AGTTCGGCGC GGTGCTGTGC
ACGGCCCTGG TCGCCGTCAC CGTGGGCGTG CGCCTCTTCT CCGGCGGCCT CGAGCTGCAA
CTCGCCCTGC TCGTGCTCCT GCTGACCCCC GAGTTCTTCG CCCCGCTGCG CGCGCTGGGG
GCCGACCGGC ACGCCGCCCT CGAGGGCCGA CCCGCCGCCG AGCGGGTCCT CGCCCTGCTC
GACCTGCCCG AACCGGACCG CGGCACCGCG GTCGTGCGCC CCGGCGTCCC GCACGTCCGG
CTCAGCGGGG TGACCCTGCG GCACGAGGGC AACGAGGTGC TCACCGGCGT CGACCTCGAC
CTGCCGCCCG GCTCGCGGAC CGCCCTCGTC GGGCCCAGCG GCGCGGGCAA GTCCAGCGTG
CTGCGGCTGC TCCTCGGCTT CGCCGGCCCC GACGAGGGCA CCGTGCTCGT CGACGGCGTC
CCGCTCGCGG CCCTGGACCC GGACGCCTGG CGGGCGCGGA TCGCCCACGT GCCGGAGCGG
CCCTGGCTGC TGCCCGGCTC GGTCCTGGAG AACGTGCGGC TGGGCCGGCC CGGCGCCACC
GTCGACGAGG TGGAGACCGC GCTGGCGCGA GCCCACCTCC TCGACGTCGT CCGGCGGCTG
CCGCAGGGTC TGGACACGCC GCTGGGGGAG GACGGTGCCC GCCTCTCCGG CGGGGAGCGG
CTGCGCATCG CGCTGGCCCG CGCCTTCGTC AAGGACGCCG CCGTCCTGCT GCTGGACGAG
CCGACCGCCC AGCTCGACCC GGACAGCGAG GCCGAGGTGC TCGCCGCGCT CGACGCCCTG
GCGCGCGGGC GGACCGTCCT CACCGTCACC CACCGCGCGG CTCCGCTGGC CCTGCACGAC
CGGGTGGTCC CGCTCGAGGA CGGCCGCATG GCACCGGACC CGGTGCCCGG CCCGGCGGCC
GTGCGGTGA
|
|---|
| Protein sequence | MGSRPAAHGP VARVLARPGP RRLALACAAL AALTAVLLVV QWALVAAVVS AVFAGRSTPG
DLLGALAGAL AAWLARAGLL ALRELLAART SARTRHEVRS ELVGKILRLG PALMAGERAG
ELVTTATEGV GKLDGLVARL LPGAVWAAVL PPLLAGTVLV LDPPSGALLL ATGPLLVFFL
WLVGSLAARS AREQWTTLGQ LGAVLVDTVR VLPTLVAYGR AGRSRRWLAD VGEAHRAATM
RVLRTAFLSG FVLEFGAVLC TALVAVTVGV RLFSGGLELQ LALLVLLLTP EFFAPLRALG
ADRHAALEGR PAAERVLALL DLPEPDRGTA VVRPGVPHVR LSGVTLRHEG NEVLTGVDLD
LPPGSRTALV GPSGAGKSSV LRLLLGFAGP DEGTVLVDGV PLAALDPDAW RARIAHVPER
PWLLPGSVLE NVRLGRPGAT VDEVETALAR AHLLDVVRRL PQGLDTPLGE DGARLSGGER
LRIALARAFV KDAAVLLLDE PTAQLDPDSE AEVLAALDAL ARGRTVLTVT HRAAPLALHD
RVVPLEDGRM APDPVPGPAA VR
|
|---|
| |