Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2393 |
Symbol | |
ID | 8754064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 2485360 |
End bp | 2486694 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | glucarate dehydratase |
Protein accession | YP_003409438 |
Protein GI | 284990884 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.617772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGACCG GCCGCACGCC CACCGTCGCC CGCGTCGAGG TGGTGCCCGT CGCCGGGCAC GACAGCATGC TGCTCAACCT CAGCGGCGCG CACGGCCCCT TCTTCACCCG CAACATCGCG ATCGTCACCG ACAGCGAGGG CCGGACCGGC GTCGGTGAGG TCCCCGGTGG CGAGGCGATC CGCCGCACCG TCGAGGACGC CGGTGCGCTG CTCGCCGGGC AGCCGGTCGC CCAGTACGGC CGGCTGCTGC GGCAGGTGGC GGCCACCTTC GCCGACCGGG ACGCCGGCGG CCGCGGCCTG CAGACCTTCG ACCTGCGGAC GACGATCCAC GCGGTCACCG CGCTGGAGTC CGCCCTGCTC GACCTGCTCG GCCAGCACCT GGAGGTGCCG GTGGCCGAGC TGCTCGGCGA GGGCCAGCAG CGCGACAGCG TGCCGATGCT GGGCTACCTC TTCTACGTCG GCGACCGGTC GGCCACCGAC CTGCCCTACC TGGCCGAGCC CGACCCGGCC GACGACTGGG AGCGGCTGCG CCGCGAGCCG GCGCTGACCC CGGAGGCCGT CGTCGCGCTC GCCGAGGCCG CGCAGGCCCG CTACGGGTTC TCCGACTTCA AGCTCAAGGG CGGGGTGCTC GCCGGGAGTG AGGAGGTCGC CGCCGTCCGG GCGCTGGCGC AGCGGTTCCC CGACGCCCGG GTCACCCTGG ACCCCAACGG CGGCTGGCTG CTGGCCGAGG CGATCGAGCT CTGCCGCGAC CTGCACGGGG TGCTGGCCTA CGCGGAGGAC CCGGTGGGCG CCGAGGGCGG CTACTCGGGC CGGGAGACCA TGGCGGAGTT CCGCCGGGCG ACCGGCCTGC CCACCGCGAC CAACATGGTC GCCACCGACT GGCGGCAGAT GGCCCACGCC GTCCGCGCGG GCGCGGTCGA CATCCCGCTG GCCGACCCGC ACTTCTGGAC CATGCGCGGC TCGGTCCGCG TCGCCCAGCT CTGCTCGGAC TTCGGCCTGA CCTGGGGCTC GCACTCCAAC AACCACTTCG ATGTGTCGCT GGCGATGTTC ACCCACGTCG GCGCCGCCGC CCCGGGGCAG ATCACCGCCC TGGACACGCA CTGGATCTGG CAGGACGGGC AGGCGTTGAC CCGCGAGCCC CTGCAGATCC GCGACGGCGC GATCGCCGTC CCCACCGCAC CGGGGCTGGG CGTCGAGCTC GACCGCGACG CCCTCGCCGC CGCGCACGAG CTGTACCTCG AGCACGGTCT CGGCGCGCGG GACGACGCCG TGGCGATGCA GTACCTCGTC CCCGGCTGGG CGTTCGACCC CAAGCGCCCC TGCCTCGTCC GTTGA
|
Protein sequence | MPTGRTPTVA RVEVVPVAGH DSMLLNLSGA HGPFFTRNIA IVTDSEGRTG VGEVPGGEAI RRTVEDAGAL LAGQPVAQYG RLLRQVAATF ADRDAGGRGL QTFDLRTTIH AVTALESALL DLLGQHLEVP VAELLGEGQQ RDSVPMLGYL FYVGDRSATD LPYLAEPDPA DDWERLRREP ALTPEAVVAL AEAAQARYGF SDFKLKGGVL AGSEEVAAVR ALAQRFPDAR VTLDPNGGWL LAEAIELCRD LHGVLAYAED PVGAEGGYSG RETMAEFRRA TGLPTATNMV ATDWRQMAHA VRAGAVDIPL ADPHFWTMRG SVRVAQLCSD FGLTWGSHSN NHFDVSLAMF THVGAAAPGQ ITALDTHWIW QDGQALTREP LQIRDGAIAV PTAPGLGVEL DRDALAAAHE LYLEHGLGAR DDAVAMQYLV PGWAFDPKRP CLVR
|
| |